Variant report

Variant	rs554378924
Chromosome Location	chr6:13880688-13880689
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3420238	chr6:13880473-13885771	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:13874800-13881800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr6:13879800-13881000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr6:13880200-13882600	Weak transcription	Sigmoid Colon	Sigmoid Colon
4	chr6:13880400-13880800	Enhancers	H9 Cell Line	embryonic stem cell
5	chr6:13880400-13880800	Enhancers	HUES48 Cell Line	embryonic stem cell
6	chr6:13880400-13882000	Enhancers	ES-I3 Cell Line	embryonic stem cell
7	chr6:13880600-13881600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr6:13880600-13881600	Weak transcription	HUES64 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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