Variant report

Variant	rs554508025
Chromosome Location	chr4:26528443-26528444
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:11 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2762417	chr4:26491768-26576800	Enhancers Weak transcription Active TSS Genic enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	esv2461473	chr4:26527455-26528878	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv3362190	chr4:26527504-26529602	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
4	esv991454	chr4:26527878-26528800	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv3464940	chr4:26528218-26528685	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv3464939	chr4:26528247-26528660	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
7	esv3464938	chr4:26528258-26528609	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
8	esv1065196	chr4:26528329-26528565	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
9	esv3464942	chr4:26528333-26528495	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
10	esv3348140	chr4:26528359-26528525	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
11	esv3370114	chr4:26528431-26528607	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:26523200-26530800	Weak transcription	Colon Smooth Muscle	Colon
2	chr4:26527800-26528800	Weak transcription	HSMMtube	muscle
3	chr4:26527800-26530600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr4:26527800-26530600	Weak transcription	HSMM	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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