Variant report

Variant	rs554627108
Chromosome Location	chr14:25074859-25074860
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1041336	chr14:24726564-25527319	Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Active TSS Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	107 gene(s)	inside rSNPs	diseases
2	nsv542000	chr14:24726564-25527319	Genic enhancers Enhancers Flanking Bivalent TSS/Enh Weak transcription Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	107 gene(s)	inside rSNPs	diseases
3	nsv510631	chr14:25045183-25172311	Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers ZNF genes & repeats Bivalent Enhancer Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
4	nsv901502	chr14:25074711-25101706	Enhancers Active TSS Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:25074600-25075600	Enhancers	Primary T cells fromperipheralblood	blood
2	chr14:25074600-25076600	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr14:25074800-25075000	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
4	chr14:25074800-25075400	Flanking Active TSS	Primary Natural Killer cells fromperipheralblood	blood
5	chr14:25074800-25076200	Enhancers	Primary T helper naive cells from peripheral blood	blood
6	chr14:25074800-25076200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
7	chr14:25074800-25076600	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
8	chr14:25074800-25076600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
9	chr14:25074800-25077000	Enhancers	GM12878-XiMat	blood
10	chr14:25074800-25077200	Enhancers	Spleen	Spleen
11	chr14:25074800-25077400	Enhancers	Primary monocytes fromperipheralblood	blood
12	chr14:25074800-25077400	Enhancers	Primary B cells from peripheral blood	blood
13	chr14:25074800-25077400	Enhancers	Monocytes-CD14+_RO01746	blood
14	chr14:25074800-25078000	Enhancers	Fetal Thymus	thymus
15	chr14:25074800-25079200	Enhancers	Primary T killer memory cells from peripheral blood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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