Variant report

Variant rs554672487
Chromosome Location chr6:117937134-117937135
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:29 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:117929400-117938600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr6:117934200-117938600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr6:117934800-117937400 Weak transcription Placenta Amnion Placenta Amnion
4 chr6:117935600-117937200 Enhancers iPS-20b Cell Line embryonic stem cell
5 chr6:117935800-117937200 Enhancers iPS-18 Cell Line embryonic stem cell
6 chr6:117936000-117937200 Weak transcription Primary T helper cells PMA-I stimulated --
7 chr6:117936200-117938400 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr6:117936600-117937200 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr6:117936600-117937200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr6:117936800-117937200 Flanking Active TSS HUES48 Cell Line embryonic stem cell
11 chr6:117936800-117937200 Flanking Active TSS HUES64 Cell Line embryonic stem cell
12 chr6:117936800-117937200 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
13 chr6:117937000-117937200 Active TSS H1 Cell Line embryonic stem cell
14 chr6:117937000-117937200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr6:117937000-117937200 Flanking Active TSS H9 Cell Line embryonic stem cell
16 chr6:117937000-117937200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
17 chr6:117937000-117937200 Flanking Active TSS ES-UCSF4 Cell Line embryonic stem cell
18 chr6:117937000-117937200 Enhancers HSMM muscle
19 chr6:117937000-117937200 Flanking Active TSS Osteobl bone
20 chr6:117937000-117937400 Active TSS ES-WA7 Cell Line embryonic stem cell
21 chr6:117937000-117937400 Active TSS HUES6 Cell Line embryonic stem cell
22 chr6:117937000-117937400 Active TSS NH-A brain
23 chr6:117937000-117937600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr6:117937000-117937600 Enhancers Primary T helper 17 cells PMA-I stimulated --
25 chr6:117937000-117937800 Active TSS ES-I3 Cell Line embryonic stem cell
26 chr6:117937000-117938000 Enhancers Placenta Placenta
27 chr6:117937000-117938200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr6:117937000-117939000 Enhancers Primary T cells fromperipheralblood blood
29 chr6:117937000-117939000 ZNF genes & repeats Primary Natural Killer cells fromperipheralblood blood

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