The 2.0 version of rSNPBase

Variant report

Variant rs554676947
Chromosome Location chr11:59397506-59397507
allele -/T
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:59384400-59402600 Weak transcription Fetal Adrenal Gland Adrenal Gland
2 chr11:59384400-59404400 Weak transcription Brain Cingulate Gyrus brain
3 chr11:59384800-59402600 Weak transcription Skeletal Muscle Male skeletal muscle
4 chr11:59384800-59402800 Weak transcription Duodenum Mucosa Duodenum
5 chr11:59384800-59404600 Weak transcription Primary T killer naive cells fromperipheralblood blood
6 chr11:59384800-59404800 Weak transcription Brain Angular Gyrus brain
7 chr11:59385000-59404400 Weak transcription Pancreatic Islets Pancreatic Islet
8 chr11:59385000-59404800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr11:59385400-59402800 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr11:59385400-59402800 Weak transcription Dnd41 blood
11 chr11:59385400-59403000 Weak transcription Primary T helper naive cells fromperipheralblood blood
12 chr11:59385400-59404200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr11:59385600-59403000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr11:59386600-59402800 Weak transcription Placenta Placenta
15 chr11:59391200-59402400 Weak transcription Muscle Satellite Cultured Cells --
16 chr11:59391800-59402200 Weak transcription Primary B cells from cord blood blood
17 chr11:59392000-59402600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
18 chr11:59392400-59403600 Weak transcription NHDF-Ad bronchial
19 chr11:59392800-59402800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
20 chr11:59392800-59403000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr11:59392800-59403200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
22 chr11:59393000-59402800 Weak transcription Primary B cells from peripheral blood blood
23 chr11:59393200-59402600 Weak transcription Primary hematopoietic stem cells blood
24 chr11:59393200-59402600 Weak transcription NHEK skin
25 chr11:59393200-59404200 Weak transcription H1 Cell Line embryonic stem cell
26 chr11:59393400-59402600 Weak transcription Spleen Spleen
27 chr11:59393400-59402800 Weak transcription Primary T helper cells fromperipheralblood blood
28 chr11:59393400-59403400 Weak transcription iPS-20b Cell Line embryonic stem cell
29 chr11:59393600-59402600 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr11:59393600-59402800 Weak transcription Fetal Intestine Large intestine
31 chr11:59393600-59403200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
32 chr11:59393600-59403400 Weak transcription HUES6 Cell Line embryonic stem cell
33 chr11:59393600-59403600 Weak transcription HUES48 Cell Line embryonic stem cell
34 chr11:59393600-59404200 Weak transcription H9 Cell Line embryonic stem cell
35 chr11:59393600-59408200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
36 chr11:59393800-59403000 Weak transcription Colon Smooth Muscle Colon
37 chr11:59393800-59403400 Weak transcription HUES64 Cell Line embryonic stem cell
38 chr11:59393800-59404200 Weak transcription iPS-15b Cell Line embryonic stem cell
39 chr11:59394000-59402200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr11:59394200-59403200 Weak transcription Duodenum Smooth Muscle Duodenum
41 chr11:59394400-59397600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr11:59394400-59402600 Weak transcription Primary T cells fromperipheralblood blood
43 chr11:59394400-59402600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
44 chr11:59394600-59402800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr11:59394600-59403200 Weak transcription Left Ventricle heart
46 chr11:59394600-59404800 Weak transcription ES-I3 Cell Line embryonic stem cell
47 chr11:59394800-59402600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
48 chr11:59395000-59404000 Weak transcription iPS-18 Cell Line embryonic stem cell
49 chr11:59395200-59402800 Weak transcription HSMMtube muscle
50 chr11:59395200-59403200 Weak transcription Aorta Aorta

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Last update: Aug 31, 2015