| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1021142 |
chr5:89102893-89897826 |
Active TSS Weak transcription Enhancers Bivalent Enhancer Strong transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
55 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv537804 |
chr5:89102893-89897826 |
Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
55 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv432750 |
chr5:89410113-90137144 |
Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
50 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv432751 |
chr5:89457044-90090444 |
Weak transcription Enhancers Active TSS Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
50 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv529544 |
chr5:89523963-90412409 |
Weak transcription Enhancers Active TSS Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
58 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv882365 |
chr5:89770768-89882618 |
Flanking Active TSS Genic enhancers Enhancers Weak transcription Strong transcription Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionmiRNA target site
|
13 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv882366 |
chr5:89826726-89894564 |
Bivalent/Poised TSS Bivalent Enhancer Weak transcription Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
nsv933668 |
chr5:89854253-89999672 |
Strong transcription Enhancers Weak transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
9 gene(s)
|
inside rSNPs
|
diseases
|
| 9 |
esv3471559 |
chr5:89876083-89876817 |
Weak transcription Enhancers
|
n/a
|
n/a
|
inside rSNPs
|
n/a
|
| 10 |
esv3471560 |
chr5:89876250-89876761 |
Enhancers Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
n/a
|
