The 2.0 version of rSNPBase

Variant report

Variant rs554867467
Chromosome Location chr4:111042841-111042842
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:111024200-111049800 Weak transcription Fetal Stomach stomach
2 chr4:111026000-111061000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr4:111026400-111046000 Weak transcription Left Ventricle heart
4 chr4:111026400-111049200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr4:111028000-111047600 Weak transcription Gastric stomach
6 chr4:111028600-111054000 Weak transcription HepG2 liver
7 chr4:111029600-111054200 Weak transcription Liver Liver
8 chr4:111030000-111060800 Weak transcription A549 lung
9 chr4:111030000-111093800 Weak transcription H9 Cell Line embryonic stem cell
10 chr4:111030000-111098800 Weak transcription H1 Cell Line embryonic stem cell
11 chr4:111031200-111043800 Weak transcription HUES6 Cell Line embryonic stem cell
12 chr4:111031800-111066200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr4:111037600-111051400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr4:111038000-111051600 Weak transcription iPS-15b Cell Line embryonic stem cell
15 chr4:111038200-111051600 Weak transcription iPS-18 Cell Line embryonic stem cell
16 chr4:111038200-111056400 Weak transcription HUES48 Cell Line embryonic stem cell
17 chr4:111038600-111053000 Weak transcription Fetal Adrenal Gland Adrenal Gland
18 chr4:111038800-111043000 Weak transcription K562 blood
19 chr4:111040400-111043800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr4:111040400-111066800 Weak transcription Esophagus oesophagus
21 chr4:111040800-111043000 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr4:111041200-111049600 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr4:111041200-111056600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr4:111041400-111043000 Weak transcription Primary hematopoietic stem cells short term culture blood
25 chr4:111041400-111043200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
26 chr4:111041400-111045800 Weak transcription GM12878-XiMat blood
27 chr4:111041400-111049200 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr4:111041400-111049200 Weak transcription Stomach Mucosa stomach
29 chr4:111041400-111053600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
30 chr4:111041400-111059400 Weak transcription ES-I3 Cell Line embryonic stem cell
31 chr4:111041600-111043000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr4:111041800-111043000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr4:111041800-111043000 Weak transcription NHDF-Ad bronchial
34 chr4:111041800-111046000 Weak transcription HUVEC blood vessel
35 chr4:111041800-111049200 Weak transcription Fetal Intestine Small intestine
36 chr4:111041800-111049600 Weak transcription iPS-20b Cell Line embryonic stem cell
37 chr4:111041800-111051800 Weak transcription HUES64 Cell Line embryonic stem cell
38 chr4:111041800-111054200 Weak transcription Dnd41 blood
39 chr4:111041800-111070600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr4:111042000-111043000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
41 chr4:111042000-111043000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr4:111042000-111043000 Weak transcription Osteobl bone
43 chr4:111042000-111043400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr4:111042000-111080200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr4:111042000-111084200 Weak transcription NHLF lung
46 chr4:111042400-111043800 Weak transcription NHEK skin
47 chr4:111042800-111044600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr4:111042800-111047400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr4:111042800-111065200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015