Variant report

Variant rs554949355
Chromosome Location chr12:65018978-65018979
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:65006200-65019000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr12:65006200-65019000 Weak transcription NHEK skin
3 chr12:65006200-65019400 Weak transcription Psoas Muscle Psoas
4 chr12:65006800-65031800 Weak transcription Dnd41 blood
5 chr12:65007000-65019200 Weak transcription iPS-18 Cell Line embryonic stem cell
6 chr12:65008600-65019000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr12:65009200-65019200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
8 chr12:65009800-65019200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
9 chr12:65009800-65019400 Weak transcription Fetal Muscle Trunk muscle
10 chr12:65010000-65023200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
11 chr12:65010200-65019400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr12:65010400-65019000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
13 chr12:65010600-65019000 Weak transcription Fetal Stomach stomach
14 chr12:65010800-65022200 Weak transcription Spleen Spleen
15 chr12:65011600-65019000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
16 chr12:65011800-65019000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr12:65012400-65019200 Enhancers Primary T helper 17 cells PMA-I stimulated --
18 chr12:65012600-65019200 Enhancers Primary T helper naive cells from peripheral blood blood
19 chr12:65013000-65019200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr12:65013200-65019000 Weak transcription Right Ventricle heart
21 chr12:65013200-65019200 Weak transcription Brain Anterior Caudate brain
22 chr12:65013200-65019400 Weak transcription Esophagus oesophagus
23 chr12:65013200-65019400 Weak transcription Ovary ovary
24 chr12:65013400-65019200 Enhancers Primary T killer memory cells from peripheral blood blood
25 chr12:65013600-65019000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr12:65013600-65019000 Weak transcription Right Atrium heart
27 chr12:65013600-65019400 Enhancers Primary monocytes fromperipheralblood blood
28 chr12:65014600-65019000 Enhancers Primary Natural Killer cells fromperipheralblood blood
29 chr12:65014800-65019000 Enhancers Primary T cells fromperipheralblood blood
30 chr12:65016400-65019200 Enhancers Primary T killer naive cells fromperipheralblood blood
31 chr12:65016800-65019400 Enhancers Breast Myoepithelial Primary Cells Breast
32 chr12:65016800-65020600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr12:65017000-65019000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
34 chr12:65017000-65019800 Enhancers HUES48 Cell Line embryonic stem cell
35 chr12:65017000-65019800 Enhancers iPS-15b Cell Line embryonic stem cell
36 chr12:65017200-65019600 Enhancers Fetal Heart heart
37 chr12:65017200-65019800 Enhancers HUES64 Cell Line embryonic stem cell
38 chr12:65017400-65019200 Enhancers Primary hematopoietic stem cells blood
39 chr12:65017400-65020200 Enhancers Small Intestine intestine
40 chr12:65017600-65019200 Enhancers Duodenum Smooth Muscle Duodenum
41 chr12:65017600-65019600 Enhancers Sigmoid Colon Sigmoid Colon
42 chr12:65017800-65019200 Enhancers Colon Smooth Muscle Colon
43 chr12:65018000-65019000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr12:65018000-65019000 Weak transcription iPS-20b Cell Line embryonic stem cell
45 chr12:65018000-65019000 Enhancers Primary T cells from cord blood blood
46 chr12:65018000-65019200 Weak transcription ES-WA7 Cell Line embryonic stem cell
47 chr12:65018000-65021200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
48 chr12:65018000-65024600 Weak transcription Aorta Aorta
49 chr12:65018200-65019000 Enhancers Colonic Mucosa Colon
50 chr12:65018200-65019000 Flanking Active TSS Monocytes-CD14+_RO01746 blood

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