The 2.0 version of rSNPBase

Variant report

Variant rs555043957
Chromosome Location chr6:134292115-134292116
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:134276200-134299000 Weak transcription Fetal Intestine Small intestine
2 chr6:134276200-134303000 Weak transcription HSMMtube muscle
3 chr6:134276600-134293000 Weak transcription Fetal Lung lung
4 chr6:134276600-134302800 Weak transcription Fetal Kidney kidney
5 chr6:134276600-134314000 Weak transcription Thymus Thymus
6 chr6:134278000-134303600 Weak transcription Dnd41 blood
7 chr6:134279400-134298800 Weak transcription Psoas Muscle Psoas
8 chr6:134279800-134294200 Weak transcription Primary T cells from cord blood blood
9 chr6:134280400-134304200 Weak transcription Primary hematopoietic stem cells blood
10 chr6:134280600-134293000 Weak transcription Liver Liver
11 chr6:134280600-134312200 Weak transcription Lung lung
12 chr6:134281000-134294400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
13 chr6:134281400-134298800 Weak transcription Ovary ovary
14 chr6:134282000-134298800 Weak transcription Gastric stomach
15 chr6:134282600-134302000 Weak transcription Placenta Placenta
16 chr6:134283000-134294200 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr6:134283200-134305600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
18 chr6:134283400-134293600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
19 chr6:134285000-134316600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr6:134286800-134292400 Weak transcription Fetal Brain Male brain
21 chr6:134286800-134293800 Weak transcription Fetal Brain Female brain
22 chr6:134286800-134299000 Weak transcription Monocytes-CD14+_RO01746 blood
23 chr6:134286800-134304200 Weak transcription Primary neutrophils fromperipheralblood blood
24 chr6:134287800-134293600 Weak transcription Brain Germinal Matrix brain
25 chr6:134288200-134294400 Weak transcription Brain Inferior Temporal Lobe brain
26 chr6:134288200-134298800 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr6:134288200-134311800 Weak transcription H9 Cell Line embryonic stem cell
28 chr6:134288400-134294000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr6:134288400-134306600 Weak transcription Cortex derived primary cultured neurospheres brain
30 chr6:134288600-134293600 Weak transcription Brain Hippocampus Middle brain
31 chr6:134288800-134292200 Weak transcription Primary B cells from peripheral blood blood
32 chr6:134288800-134293600 Weak transcription Brain Cingulate Gyrus brain
33 chr6:134288800-134294200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr6:134288800-134299000 Weak transcription Brain Angular Gyrus brain
35 chr6:134289000-134293000 Weak transcription ES-WA7 Cell Line embryonic stem cell
36 chr6:134289200-134293000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr6:134289200-134293000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr6:134289200-134293000 Weak transcription HSMM muscle
39 chr6:134289200-134293400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr6:134289200-134293600 Weak transcription A549 lung
41 chr6:134289200-134294400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr6:134289200-134298800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr6:134289400-134293000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr6:134289400-134293000 Weak transcription Osteobl bone
45 chr6:134289400-134298800 Weak transcription Hela-S3 cervix
46 chr6:134289400-134298800 Weak transcription NHEK skin
47 chr6:134289400-134299400 Weak transcription HUVEC blood vessel
48 chr6:134289600-134293200 Weak transcription Muscle Satellite Cultured Cells --
49 chr6:134289600-134293400 Weak transcription NH-A brain
50 chr6:134289600-134299000 Weak transcription HMEC breast

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Last update: Aug 31, 2015