Variant report

Variant	rs555051828
Chromosome Location	chr9:102036974-102036975
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv893620	chr9:102029791-102194921	Enhancers Flanking Bivalent TSS/Enh Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv525784	chr9:102036913-102037970	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:102022200-102038000	Weak transcription	Aorta	Aorta
2	chr9:102034800-102037200	Enhancers	GM12878-XiMat	blood
3	chr9:102036400-102037000	Enhancers	Brain Cingulate Gyrus	brain
4	chr9:102036400-102037200	Enhancers	Brain Hippocampus Middle	brain
5	chr9:102036400-102037200	Enhancers	Brain Inferior Temporal Lobe	brain
6	chr9:102036400-102037400	Enhancers	Brain Substantia Nigra	brain
7	chr9:102036600-102037200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
8	chr9:102036600-102037400	Enhancers	HepG2	liver
9	chr9:102036800-102037200	Enhancers	Brain Angular Gyrus	brain
10	chr9:102036800-102039800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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