| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv869548 |
chr3:120320731-121076337 |
Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
25 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv916869 |
chr3:120360281-120973169 |
Active TSS Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Enhancers Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
22 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv1005275 |
chr3:120700604-121102735 |
Strong transcription ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
4 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv998555 |
chr3:120700604-121348015 |
Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
19 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv1008441 |
chr3:120730017-121102735 |
Enhancers Weak transcription Strong transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
4 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv536709 |
chr3:120730017-121102735 |
Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Bivalent/Poised TSS Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
4 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv1005525 |
chr3:120749594-121027161 |
ZNF genes & repeats Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
nsv1012777 |
chr3:120883846-120974864 |
Enhancers Strong transcription Active TSS ZNF genes & repeats Weak transcription
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 9 |
nsv829701 |
chr3:120935402-121115932 |
Weak transcription Enhancers Strong transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 10 |
nsv518828 |
chr3:120941578-120977383 |
Enhancers Strong transcription Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 11 |
nsv521397 |
chr3:120970900-121192350 |
Weak transcription Strong transcription Active TSS Enhancers ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 12 |
nsv591395 |
chr3:120970900-121501070 |
Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Genic enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
47 gene(s)
|
inside rSNPs
|
diseases
|
| 13 |
nsv591396 |
chr3:120970900-121557533 |
Strong transcription Active TSS Flanking Active TSS Enhancers Weak transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
50 gene(s)
|
inside rSNPs
|
diseases
|
Variant overlapped rSNPs/rCNVs (count:13 , 50 per page) page:
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