Variant report

Variant	rs555132947
Chromosome Location	chr8:9259937-9259938
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:10 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv917117	chr8:8621658-9313799	Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
2	nsv817373	chr8:8857854-9361049	Enhancers ZNF genes & repeats Weak transcription Active TSS Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
3	nsv949434	chr8:8993551-9318404	Enhancers Weak transcription Strong transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
4	nsv1022967	chr8:9023771-9261351	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
5	nsv539462	chr8:9023771-9261351	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
6	nsv530864	chr8:9097498-9914548	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
7	nsv497927	chr8:9097611-9544519	Flanking Active TSS Enhancers Strong transcription Weak transcription Bivalent Enhancer ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
8	nsv1030524	chr8:9183482-9412833	Flanking Active TSS Enhancers Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
9	esv2764086	chr8:9216584-9334601	Enhancers Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
10	nsv1026506	chr8:9258997-9338042	Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:9248000-9260000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr8:9259800-9260000	Enhancers	iPS-15b Cell Line	embryonic stem cell
3	chr8:9259800-9260000	Flanking Bivalent TSS/Enh	iPS-18 Cell Line	embryonic stem cell
4	chr8:9259800-9260000	Enhancers	Cortex derived primary cultured neurospheres	brain
5	chr8:9259800-9260000	Flanking Active TSS	Brain Angular Gyrus	brain
6	chr8:9259800-9260000	Flanking Active TSS	Brain Hippocampus Middle	brain
7	chr8:9259800-9260000	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
8	chr8:9259800-9260000	Flanking Active TSS	Brain Substantia Nigra	brain
9	chr8:9259800-9260000	Enhancers	Fetal Brain Male	brain
10	chr8:9259800-9260000	Enhancers	HSMM	muscle
11	chr8:9259800-9260200	Enhancers	iPS-20b Cell Line	embryonic stem cell
12	chr8:9259800-9260200	Enhancers	Fetal Muscle Leg	muscle
13	chr8:9259800-9260200	Active TSS	Psoas Muscle	Psoas
14	chr8:9259800-9260200	Bivalent/Poised TSS	Skeletal Muscle Female	skeletal muscle
15	chr8:9259800-9260400	Enhancers	HUES48 Cell Line	embryonic stem cell
16	chr8:9259800-9260400	Bivalent/Poised TSS	Skeletal Muscle Male	skeletal muscle
17	chr8:9259800-9260600	Enhancers	H1 Cell Line	embryonic stem cell
18	chr8:9259800-9260600	Enhancers	HUES64 Cell Line	embryonic stem cell
19	chr8:9259800-9260600	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
20	chr8:9259800-9260600	Active TSS	Brain Anterior Caudate	brain
21	chr8:9259800-9260600	Active TSS	Brain Cingulate Gyrus	brain
22	chr8:9259800-9260600	Flanking Active TSS	Brain Germinal Matrix	brain
23	chr8:9259800-9260600	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain

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