Variant report

Variant	rs555138317
Chromosome Location	chr6:164544776-164544777
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 71 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:71 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1026707	chr6:164188210-164749206	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	nsv538527	chr6:164188210-164749206	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
3	nsv1029952	chr6:164463355-165268911	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
4	esv1828570	chr6:164528407-164546547	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
5	esv1825412	chr6:164533751-164546190	Bivalent Enhancer Weak transcription Enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
6	esv1825001	chr6:164533751-164546547	ZNF genes & repeats Bivalent Enhancer Weak transcription Enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
7	nsv5583	chr6:164541423-164559515	ZNF genes & repeats Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
8	esv3340016	chr6:164542062-164546460	ZNF genes & repeats Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
9	esv3499606	chr6:164542312-164548310	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
10	esv3513446	chr6:164542712-164548910	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
11	esv3513447	chr6:164542712-164548910	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
12	nsv435834	chr6:164542824-164549853	Enhancers ZNF genes & repeats Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
13	nsv511923	chr6:164542970-164547203	ZNF genes & repeats Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
14	nsv819202	chr6:164542970-164548143	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
15	nsv823915	chr6:164542991-164546399	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
16	esv3499604	chr6:164543004-164548768	ZNF genes & repeats Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
17	esv7046	chr6:164543197-164547422	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
18	esv1797578	chr6:164543238-164546190	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
19	esv1792756	chr6:164543238-164546547	ZNF genes & repeats Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
20	esv1793087	chr6:164543238-164546547	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
21	esv1804005	chr6:164543238-164546547	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
22	esv1825881	chr6:164543238-164546547	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
23	nsv511318	chr6:164543238-164549712	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
24	esv13871	chr6:164543239-164547423	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
25	esv3473699	chr6:164543313-164547297	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
26	esv3499601	chr6:164543340-164547280	Enhancers ZNF genes & repeats Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
27	esv3499602	chr6:164543342-164547297	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
28	esv3499608	chr6:164543361-164547225	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
29	esv3473701	chr6:164543362-164548960	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
30	esv3473704	chr6:164543368-164547263	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
31	esv3473703	chr6:164543376-164547258	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
32	esv3473700	chr6:164543381-164547216	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
33	esv3499603	chr6:164543392-164547236	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
34	esv3473702	chr6:164543433-164547195	Enhancers ZNF genes & repeats Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
35	esv3499605	chr6:164543443-164547194	Enhancers ZNF genes & repeats Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
36	nsv499575	chr6:164543446-164547192	ZNF genes & repeats Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
37	esv3473705	chr6:164543447-164547192	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
38	esv3499609	chr6:164543447-164547192	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
39	esv1801851	chr6:164543674-164545960	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
40	esv1833133	chr6:164543674-164545960	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
41	esv1827465	chr6:164543674-164546284	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
42	nsv605210	chr6:164543674-164546284	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
43	esv1794163	chr6:164543674-164546547	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
44	esv1796343	chr6:164543674-164546547	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
45	esv1796404	chr6:164543674-164546547	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
46	esv1798670	chr6:164543674-164546547	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
47	esv1803152	chr6:164543674-164546547	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
48	esv1826576	chr6:164543674-164546547	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
49	esv1829977	chr6:164543674-164546547	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
50	esv1830847	chr6:164543674-164546547	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:164543600-164554400	Weak transcription	Pancreas	Pancrea
2	chr6:164544600-164544800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived

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