The 2.0 version of rSNPBase

Variant report

Variant rs555144235
Chromosome Location chr9:93622231-93622232
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:93601800-93642200 Weak transcription Rectal Smooth Muscle rectum
2 chr9:93605000-93622800 Weak transcription Adipose Nuclei Adipose
3 chr9:93605000-93633000 Weak transcription Fetal Kidney kidney
4 chr9:93605800-93631000 Strong transcription Primary neutrophils fromperipheralblood blood
5 chr9:93608200-93624400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr9:93610400-93624600 Weak transcription Duodenum Smooth Muscle Duodenum
7 chr9:93611200-93642200 Weak transcription Stomach Mucosa stomach
8 chr9:93612400-93623200 Weak transcription Colonic Mucosa Colon
9 chr9:93614800-93623800 Weak transcription Left Ventricle heart
10 chr9:93615400-93624000 Weak transcription Gastric stomach
11 chr9:93615600-93623200 Weak transcription Esophagus oesophagus
12 chr9:93615600-93623600 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr9:93616800-93624400 Weak transcription Lung lung
14 chr9:93617200-93624000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr9:93617200-93640600 Weak transcription K562 blood
16 chr9:93617400-93622600 Weak transcription Rectal Mucosa Donor 29 rectum
17 chr9:93617400-93622800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr9:93617400-93629600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr9:93617400-93640600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr9:93617600-93623400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr9:93617800-93640600 Weak transcription NHEK skin
22 chr9:93619000-93623800 Genic enhancers Primary hematopoietic stem cells short term culture blood
23 chr9:93619200-93623600 Genic enhancers Primary B cells from peripheral blood blood
24 chr9:93619400-93630000 Strong transcription Thymus Thymus
25 chr9:93619800-93622800 Weak transcription GM12878-XiMat blood
26 chr9:93619800-93627000 Strong transcription Fetal Intestine Small intestine
27 chr9:93620200-93623000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr9:93620600-93624000 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr9:93620800-93625600 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr9:93621000-93622800 Weak transcription Fetal Stomach stomach
31 chr9:93621000-93623200 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr9:93621200-93626600 Strong transcription Fetal Thymus thymus
33 chr9:93621200-93631400 Strong transcription Primary B cells from cord blood blood
34 chr9:93621400-93623800 Genic enhancers Monocytes-CD14+_RO01746 blood
35 chr9:93621600-93622600 Genic enhancers Primary monocytes fromperipheralblood blood
36 chr9:93621600-93626200 Weak transcription Primary T cells from cord blood blood
37 chr9:93621800-93622400 Enhancers Pancreas Pancrea
38 chr9:93621800-93623800 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
39 chr9:93621800-93623800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
40 chr9:93622000-93622600 Enhancers Spleen Spleen
41 chr9:93622000-93622800 Strong transcription Primary hematopoietic stem cells blood
42 chr9:93622000-93623200 Genic enhancers Duodenum Mucosa Duodenum
43 chr9:93622200-93624200 Weak transcription Fetal Intestine Large intestine

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Last update: Aug 31, 2015