Variant report

Variant	rs555285959
Chromosome Location	chr9:106000073-106000074
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv893660	chr9:105942389-106068965	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv893661	chr9:105942389-106076270	Active TSS Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv893662	chr9:105947343-106068965	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	nsv825022	chr9:105999365-106004232	Enhancers Weak transcription Active TSS	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:105999400-106000200	Active TSS	ES-WA7 Cell Line	embryonic stem cell
2	chr9:105999600-106000200	Active TSS	ES-I3 Cell Line	embryonic stem cell
3	chr9:105999600-106000400	Active TSS	HUES6 Cell Line	embryonic stem cell
4	chr9:105999800-106000200	Enhancers	H1 Cell Line	embryonic stem cell
5	chr9:105999800-106000200	Active TSS	H9 Cell Line	embryonic stem cell
6	chr9:105999800-106000200	Active TSS	HUES48 Cell Line	embryonic stem cell
7	chr9:105999800-106000200	Active TSS	iPS-15b Cell Line	embryonic stem cell
8	chr9:106000000-106000200	Enhancers	iPS-18 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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