| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
esv2758307 |
chr12:48429702-48825499 |
Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
57 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
esv2759898 |
chr12:48429702-48825499 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
57 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv508673 |
chr12:48489786-48567138 |
Flanking Active TSS Weak transcription Enhancers Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
23 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv8971 |
chr12:48536526-48758501 |
Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Strong transcription Bivalent/Poised TSS Genic enhancers Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
39 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
esv34439 |
chr12:48541757-48779562 |
Bivalent/Poised TSS Flanking Active TSS Weak transcription Active TSS Enhancers Strong transcription Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
39 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
esv2757502 |
chr12:48547128-48779562 |
Genic enhancers Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
39 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv976608 |
chr12:48558446-48563571 |
Enhancers Weak transcription Bivalent/Poised TSS Active TSS Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive region
|
6 gene(s)
|
inside rSNPs
|
diseases
|
Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page:
1
