Variant report

Variant rs555355862
Chromosome Location chr4:3441977-3441978
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:3417200-3444800 Weak transcription Primary hematopoietic stem cells blood
2 chr4:3419200-3444600 Weak transcription Primary monocytes fromperipheralblood blood
3 chr4:3427000-3442000 Weak transcription Colon Smooth Muscle Colon
4 chr4:3427000-3443200 Weak transcription Brain Substantia Nigra brain
5 chr4:3430800-3445200 Weak transcription Primary T regulatory cells fromperipheralblood blood
6 chr4:3431600-3442600 Weak transcription Colonic Mucosa Colon
7 chr4:3431800-3444600 Weak transcription Primary hematopoietic stem cells short term culture blood
8 chr4:3433000-3445200 Weak transcription Primary T helper naive cells fromperipheralblood blood
9 chr4:3433200-3444800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr4:3433600-3444600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr4:3434200-3442600 Weak transcription Liver Liver
12 chr4:3436400-3443000 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr4:3436400-3444400 Weak transcription Primary T cells from cord blood blood
14 chr4:3436400-3444400 Weak transcription Stomach Smooth Muscle stomach
15 chr4:3436400-3445200 Weak transcription Fetal Intestine Small intestine
16 chr4:3436600-3449000 Weak transcription Fetal Brain Female brain
17 chr4:3436800-3443000 Enhancers Fetal Muscle Leg muscle
18 chr4:3436800-3445400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr4:3437000-3442600 Enhancers Fetal Muscle Trunk muscle
20 chr4:3437000-3450000 Weak transcription Brain Germinal Matrix brain
21 chr4:3437200-3451200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr4:3437800-3443000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr4:3438000-3448000 Weak transcription Right Ventricle heart
24 chr4:3438600-3444800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr4:3438800-3445400 Weak transcription Gastric stomach
26 chr4:3439000-3445400 Weak transcription Pancreas Pancrea
27 chr4:3439200-3445400 Weak transcription Skeletal Muscle Female skeletal muscle
28 chr4:3439400-3442600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr4:3439400-3442600 Weak transcription NH-A brain
30 chr4:3439400-3442800 Weak transcription Osteobl bone
31 chr4:3439600-3442600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr4:3440000-3442800 Weak transcription Skeletal Muscle Male skeletal muscle
33 chr4:3440400-3442600 Weak transcription Esophagus oesophagus
34 chr4:3440400-3445200 Weak transcription Breast Myoepithelial Primary Cells Breast
35 chr4:3440600-3442600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr4:3441000-3443200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr4:3441200-3442000 ZNF genes & repeats Fetal Stomach stomach
38 chr4:3441400-3442000 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr4:3441400-3442200 Enhancers Brain Hippocampus Middle brain
40 chr4:3441400-3443200 Enhancers Fetal Lung lung
41 chr4:3441400-3443800 Enhancers A549 lung
42 chr4:3441600-3442200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr4:3441600-3442800 Enhancers HepG2 liver
44 chr4:3441600-3443200 Enhancers NHEK skin
45 chr4:3441600-3443400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
46 chr4:3441800-3442000 Enhancers Lung lung
47 chr4:3441800-3442600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
48 chr4:3441800-3442800 Enhancers HMEC breast
49 chr4:3441800-3443000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
50 chr4:3441800-3443000 Weak transcription Spleen Spleen

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