Variant report

Variant rs555484626
Chromosome Location chr21:48060377-48060378
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:48056200-48061200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr21:48056200-48061200 Weak transcription Lung lung
3 chr21:48056200-48063000 Weak transcription Pancreas Pancrea
4 chr21:48056200-48065800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr21:48056200-48068200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr21:48056200-48081400 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr21:48056400-48063000 Weak transcription Colonic Mucosa Colon
8 chr21:48056400-48063000 Weak transcription Ovary ovary
9 chr21:48056600-48061200 Weak transcription H9 Cell Line embryonic stem cell
10 chr21:48056600-48063400 Weak transcription iPS-15b Cell Line embryonic stem cell
11 chr21:48056600-48063400 Weak transcription iPS-18 Cell Line embryonic stem cell
12 chr21:48056800-48074000 Strong transcription HUES64 Cell Line embryonic stem cell
13 chr21:48057000-48068400 Weak transcription Stomach Mucosa stomach
14 chr21:48057200-48061000 Weak transcription Esophagus oesophagus
15 chr21:48057200-48061000 Weak transcription Fetal Kidney kidney
16 chr21:48057200-48061200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr21:48057200-48061200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
18 chr21:48058200-48060800 Weak transcription Fetal Stomach stomach
19 chr21:48058200-48068400 Weak transcription Psoas Muscle Psoas
20 chr21:48058400-48060800 Weak transcription Fetal Intestine Large intestine
21 chr21:48058400-48060800 Weak transcription Fetal Thymus thymus
22 chr21:48058400-48061000 Weak transcription Thymus Thymus
23 chr21:48058400-48061400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr21:48058600-48060400 Weak transcription Fetal Muscle Trunk muscle
25 chr21:48058600-48060600 Weak transcription Primary T regulatory cells fromperipheralblood blood
26 chr21:48058600-48060600 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr21:48058600-48060800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr21:48058600-48060800 Weak transcription Breast Myoepithelial Primary Cells Breast
29 chr21:48058600-48060800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr21:48058600-48060800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
31 chr21:48058600-48060800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
32 chr21:48058600-48060800 Weak transcription Fetal Adrenal Gland Adrenal Gland
33 chr21:48058600-48060800 Weak transcription Fetal Intestine Small intestine
34 chr21:48058600-48060800 Weak transcription Fetal Muscle Leg muscle
35 chr21:48058600-48060800 Weak transcription Stomach Smooth Muscle stomach
36 chr21:48058600-48061000 Weak transcription HUES6 Cell Line embryonic stem cell
37 chr21:48058600-48061000 Weak transcription iPS-20b Cell Line embryonic stem cell
38 chr21:48058600-48061000 Weak transcription Primary B cells from peripheral blood blood
39 chr21:48058600-48061000 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr21:48058600-48061000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr21:48058600-48061000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
42 chr21:48058600-48061000 Weak transcription Adipose Nuclei Adipose
43 chr21:48058600-48061000 Weak transcription Liver Liver
44 chr21:48058600-48061000 Weak transcription Duodenum Mucosa Duodenum
45 chr21:48058600-48061000 Weak transcription Rectal Mucosa Donor 29 rectum
46 chr21:48058600-48061000 Weak transcription Rectal Mucosa Donor 31 rectum
47 chr21:48058600-48061200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
48 chr21:48058600-48061200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
49 chr21:48058600-48061200 Weak transcription Left Ventricle heart
50 chr21:48058600-48061200 Weak transcription Sigmoid Colon Sigmoid Colon

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