The 2.0 version of rSNPBase

Variant report

Variant rs555509462
Chromosome Location chr10:118706855-118706856
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:118652000-118736200 Weak transcription Duodenum Smooth Muscle Duodenum
2 chr10:118653400-118707600 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr10:118663800-118707000 Weak transcription Stomach Smooth Muscle stomach
4 chr10:118697600-118707000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr10:118699000-118707600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr10:118699200-118707000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
7 chr10:118699200-118709800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr10:118699200-118710400 Weak transcription Pancreas Pancrea
9 chr10:118699200-118712400 Weak transcription Esophagus oesophagus
10 chr10:118699200-118724200 Weak transcription Fetal Intestine Small intestine
11 chr10:118699200-118740600 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr10:118699200-118748200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr10:118700000-118710400 Weak transcription Adipose Nuclei Adipose
14 chr10:118700000-118736800 Weak transcription Rectal Mucosa Donor 29 rectum
15 chr10:118700200-118712400 Weak transcription Placenta Placenta
16 chr10:118701000-118733400 Weak transcription Fetal Kidney kidney
17 chr10:118702400-118727200 Weak transcription Stomach Mucosa stomach
18 chr10:118703200-118721000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr10:118703400-118720600 Weak transcription Fetal Brain Male brain
20 chr10:118703400-118737000 Weak transcription Aorta Aorta
21 chr10:118703600-118710000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr10:118703600-118740000 Weak transcription Duodenum Mucosa Duodenum
23 chr10:118703600-118752200 Weak transcription Gastric stomach
24 chr10:118703800-118710400 Weak transcription Fetal Brain Female brain
25 chr10:118703800-118720800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr10:118704000-118710400 Weak transcription Breast Myoepithelial Primary Cells Breast
27 chr10:118704200-118716600 Weak transcription ES-WA7 Cell Line embryonic stem cell
28 chr10:118704200-118721000 Weak transcription Ovary ovary
29 chr10:118704200-118726600 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr10:118704400-118709600 Weak transcription Brain Germinal Matrix brain
31 chr10:118704400-118709800 Weak transcription Fetal Stomach stomach
32 chr10:118704800-118709600 Weak transcription Liver Liver
33 chr10:118704800-118710200 Weak transcription Fetal Intestine Large intestine
34 chr10:118706200-118710200 Enhancers Primary monocytes fromperipheralblood blood
35 chr10:118706400-118707600 Enhancers Brain Anterior Caudate brain
36 chr10:118706400-118707600 Enhancers Hela-S3 cervix
37 chr10:118706400-118707800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr10:118706400-118707800 Flanking Active TSS A549 lung
39 chr10:118706400-118707800 Enhancers HMEC breast
40 chr10:118706400-118708000 Enhancers HUES6 Cell Line embryonic stem cell
41 chr10:118706400-118708000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
42 chr10:118706400-118708000 Enhancers Brain Angular Gyrus brain
43 chr10:118706400-118708000 Enhancers Fetal Adrenal Gland Adrenal Gland
44 chr10:118706400-118708000 Enhancers NH-A brain
45 chr10:118706400-118708000 Enhancers NHEK skin
46 chr10:118706400-118708200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr10:118706400-118708200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr10:118706400-118708200 Enhancers HSMM muscle
49 chr10:118706400-118708200 Enhancers K562 blood
50 chr10:118706400-118708400 Enhancers Brain Substantia Nigra brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015