Variant report

Variant	rs555602120
Chromosome Location	chr2:76772894-76772895
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 27 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:27 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv874317	chr2:76554077-76890567	Genic enhancers Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Strong transcription Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	esv1800238	chr2:76746272-76786845	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv1803934	chr2:76746272-76786845	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
4	esv1804555	chr2:76746272-76786845	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv1805818	chr2:76746272-76786845	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv1820531	chr2:76746272-76786845	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
7	esv1822967	chr2:76746272-76786845	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
8	esv1834518	chr2:76746272-76786845	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
9	esv1840522	chr2:76746272-76786845	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
10	esv1801302	chr2:76764537-76789625	Flanking Active TSS Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
11	esv1814841	chr2:76764537-76789625	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
12	nsv582228	chr2:76769627-76775383	Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
13	esv1005528	chr2:76769672-76776464	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
14	esv1796671	chr2:76770013-76775393	Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
15	esv1798564	chr2:76770013-76775393	Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
16	esv1810794	chr2:76770013-76775393	Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
17	esv1820370	chr2:76770013-76775393	Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
18	esv1821373	chr2:76770013-76775393	Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
19	esv1840542	chr2:76770013-76775393	Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
20	esv3456957	chr2:76771644-76777342	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
21	esv3333969	chr2:76772394-76776892	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	inside rSNPs	diseases
22	esv1794252	chr2:76772448-76775383	Enhancers	n/a	n/a	inside rSNPs	diseases
23	esv1797516	chr2:76772448-76775383	Enhancers	n/a	n/a	inside rSNPs	diseases
24	esv1800591	chr2:76772448-76775383	Enhancers	n/a	n/a	inside rSNPs	diseases
25	esv1810026	chr2:76772448-76775383	Enhancers	n/a	n/a	inside rSNPs	diseases
26	esv3456958	chr2:76772469-76776817	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
27	esv3426062	chr2:76772744-76776492	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:76771800-76773000	Enhancers	ES-I3 Cell Line	embryonic stem cell
2	chr2:76771800-76773000	Enhancers	iPS-15b Cell Line	embryonic stem cell
3	chr2:76772400-76773000	Enhancers	HUES48 Cell Line	embryonic stem cell

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