Variant report

Variant	rs555662705
Chromosome Location	chr4:147971695-147971696
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv880240	chr4:147905897-148032003	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv1016598	chr4:147931134-148012064	Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
3	nsv968013	chr4:147971119-147974814	Active TSS Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:147967800-147971800	Weak transcription	Fetal Kidney	kidney
2	chr4:147968400-147971800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr4:147970600-147972800	Enhancers	Psoas Muscle	Psoas
4	chr4:147970600-147972800	Enhancers	Hela-S3	cervix
5	chr4:147970800-147972200	Enhancers	Fetal Heart	heart
6	chr4:147970800-147972600	Enhancers	Fetal Lung	lung
7	chr4:147971000-147971800	Enhancers	Fetal Muscle Leg	muscle
8	chr4:147971000-147972000	Enhancers	Colon Smooth Muscle	Colon
9	chr4:147971000-147972200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
10	chr4:147971000-147972200	Enhancers	NHLF	lung
11	chr4:147971000-147972400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
12	chr4:147971200-147971800	Flanking Active TSS	Muscle Satellite Cultured Cells	--
13	chr4:147971200-147971800	Enhancers	Fetal Stomach	stomach
14	chr4:147971200-147971800	Enhancers	Rectal Smooth Muscle	rectum
15	chr4:147971200-147972000	Enhancers	iPS-20b Cell Line	embryonic stem cell
16	chr4:147971400-147971800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
17	chr4:147971400-147971800	Active TSS	NHDF-Ad	bronchial
18	chr4:147971400-147972000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
19	chr4:147971600-147971800	Active TSS	Stomach Smooth Muscle	stomach
20	chr4:147971600-147972000	Enhancers	HMEC	breast
21	chr4:147971600-147972800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
22	chr4:147971600-147978400	Weak transcription	Aorta	Aorta
23	chr4:147971600-147978400	Weak transcription	Placenta Amnion	Placenta Amnion

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