The 2.0 version of rSNPBase

Variant report

Variant rs555678
Chromosome Location chr7:105382750-105382751
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:105352600-105388600 Weak transcription Aorta Aorta
2 chr7:105352800-105383000 Weak transcription Duodenum Smooth Muscle Duodenum
3 chr7:105352800-105383800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr7:105352800-105392400 Weak transcription Breast Myoepithelial Primary Cells Breast
5 chr7:105354400-105390000 Weak transcription Primary T regulatory cells fromperipheralblood blood
6 chr7:105354400-105399800 Weak transcription Ovary ovary
7 chr7:105354600-105392000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
8 chr7:105354800-105387600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr7:105355000-105401000 Weak transcription NHEK skin
10 chr7:105359800-105406200 Weak transcription Gastric stomach
11 chr7:105359800-105438600 Weak transcription Pancreas Pancrea
12 chr7:105360000-105391400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr7:105360600-105388200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr7:105360800-105406200 Weak transcription Fetal Muscle Leg muscle
15 chr7:105361200-105394400 Weak transcription Skeletal Muscle Male skeletal muscle
16 chr7:105362800-105383800 Weak transcription iPS-15b Cell Line embryonic stem cell
17 chr7:105364400-105383800 Weak transcription Lung lung
18 chr7:105364400-105402000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
19 chr7:105364600-105390400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
20 chr7:105364600-105393000 Weak transcription Brain Inferior Temporal Lobe brain
21 chr7:105364600-105416400 Weak transcription Brain Angular Gyrus brain
22 chr7:105366600-105390200 Weak transcription Fetal Muscle Trunk muscle
23 chr7:105367200-105428800 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr7:105367400-105391600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr7:105374400-105390400 Weak transcription Primary T cells fromperipheralblood blood
26 chr7:105375000-105386800 Weak transcription Fetal Adrenal Gland Adrenal Gland
27 chr7:105375600-105400200 Weak transcription Colon Smooth Muscle Colon
28 chr7:105375600-105400400 Weak transcription Rectal Smooth Muscle rectum
29 chr7:105378400-105391800 Weak transcription Fetal Intestine Large intestine
30 chr7:105379400-105416200 Weak transcription Left Ventricle heart
31 chr7:105380400-105383800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
32 chr7:105380600-105384200 Enhancers Thymus Thymus
33 chr7:105380600-105384600 Enhancers Fetal Thymus thymus
34 chr7:105381000-105383200 Weak transcription Spleen Spleen
35 chr7:105381000-105386400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
36 chr7:105381600-105399000 Weak transcription Primary T helper naive cells from peripheral blood blood
37 chr7:105382000-105383800 Enhancers Placenta Placenta
38 chr7:105382400-105383000 Enhancers Primary T cells from cord blood blood
39 chr7:105382400-105384000 Enhancers Stomach Smooth Muscle stomach
40 chr7:105382400-105388800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
41 chr7:105382400-105388800 Weak transcription Fetal Intestine Small intestine
42 chr7:105382600-105383000 Enhancers Primary T helper cells PMA-I stimulated --
43 chr7:105382600-105383600 Enhancers Fetal Stomach stomach
44 chr7:105382600-105384000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
45 chr7:105382600-105410400 Weak transcription Right Atrium heart

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Last update: Aug 31, 2015