Variant report

Variant	rs555691837
Chromosome Location	chr10:99530394-99530395
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1817777	chr10:99196035-99558169	Weak transcription Flanking Active TSS Active TSS Enhancers Genic enhancers Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
2	nsv467441	chr10:99472710-99541104	Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
3	nsv552026	chr10:99472710-99541104	Weak transcription Enhancers Transcr. at gene 5' and 3' Active TSS Genic enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
4	esv3340017	chr10:99530387-99533135	Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:99520400-99530400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
2	chr10:99522200-99530800	Weak transcription	Right Ventricle	heart
3	chr10:99522600-99530400	Weak transcription	Primary T cells from cord blood	blood
4	chr10:99523200-99530400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
5	chr10:99525000-99530400	Weak transcription	Primary B cells from peripheral blood	blood
6	chr10:99525800-99530400	Weak transcription	HSMM	muscle
7	chr10:99526400-99531200	Weak transcription	K562	blood
8	chr10:99527600-99530600	Weak transcription	Gastric	stomach
9	chr10:99529600-99531400	Bivalent Enhancer	Primary monocytes fromperipheralblood	blood
10	chr10:99529800-99530400	Active TSS	Pancreas	Pancrea
11	chr10:99530000-99530400	Bivalent Enhancer	Fetal Intestine Large	intestine
12	chr10:99530000-99531400	Bivalent Enhancer	Monocytes-CD14+_RO01746	blood
13	chr10:99530200-99530400	Bivalent/Poised TSS	Fetal Intestine Small	intestine
14	chr10:99530200-99530800	Active TSS	Right Atrium	heart
15	chr10:99530200-99531000	Bivalent Enhancer	Breast Myoepithelial Primary Cells	Breast
16	chr10:99530200-99531200	Bivalent Enhancer	Fetal Thymus	thymus
17	chr10:99530200-99532200	Bivalent/Poised TSS	Duodenum Mucosa	Duodenum

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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