| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv492277 |
chr5:59905195-60180834 |
Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
13 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv462198 |
chr5:59969015-60116613 |
Strong transcription Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionmiRNA target site
|
10 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv598298 |
chr5:59969015-60116613 |
ZNF genes & repeats Flanking Active TSS Enhancers Weak transcription Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionmiRNA target site
|
10 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv1023403 |
chr5:59969534-60079822 |
Flanking Active TSS Active TSS ZNF genes & repeats Enhancers Weak transcription Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionmiRNA target site
|
10 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv4850 |
chr5:59976186-60039810 |
Strong transcription Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive region
|
10 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv508362 |
chr5:59990308-60050894 |
Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionmiRNA target site
|
10 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
esv1801919 |
chr5:59995393-60013913 |
Active TSS Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
9 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
nsv934153 |
chr5:60004982-60309751 |
Active TSS Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
15 gene(s)
|
inside rSNPs
|
diseases
|
| 9 |
esv2763456 |
chr5:60007355-60151767 |
Bivalent Enhancer Flanking Active TSS Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionmiRNA target site
|
5 gene(s)
|
inside rSNPs
|
diseases
|
