| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv817407 |
chr5:1495354-2191460 |
Weak transcription Strong transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
107 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv869236 |
chr5:1719263-2259100 |
Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer Enhancers Weak transcription ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
66 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv915846 |
chr5:1891098-2167677 |
Active TSS Genic enhancers Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
21 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv1026930 |
chr5:1898993-2126061 |
Bivalent/Poised TSS Flanking Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
21 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv427705 |
chr5:1950467-2115059 |
Active TSS Weak transcription Enhancers Strong transcription ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
14 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv596900 |
chr5:2020274-2066165 |
Enhancers Bivalent Enhancer Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats
|
Chromatin interactive region
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv1028582 |
chr5:2038130-2063667 |
Active TSS Bivalent Enhancer Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
nsv1032941 |
chr5:2038130-2072872 |
Enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 9 |
esv2830148 |
chr5:2041665-2058143 |
Weak transcription Enhancers ZNF genes & repeats Strong transcription
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 10 |
nsv520041 |
chr5:2041665-2066165 |
Enhancers Strong transcription Weak transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 11 |
nsv596901 |
chr5:2041665-2066165 |
ZNF genes & repeats Bivalent Enhancer Enhancers Weak transcription Bivalent/Poised TSS Strong transcription
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 12 |
nsv596902 |
chr5:2041665-2069209 |
Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Strong transcription Bivalent/Poised TSS
|
Chromatin interactive regionlncRNA
|
n/a
|
inside rSNPs
|
diseases
|
| 13 |
nsv1032759 |
chr5:2044117-2091631 |
Enhancers Strong transcription Weak transcription Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
Variant overlapped rSNPs/rCNVs (count:13 , 50 per page) page:
1
