Variant report

Variant	rs555997478
Chromosome Location	chr3:43264240-43264241
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834672	chr3:43132722-43306272	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv965160	chr3:43264197-43270925	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:43256200-43266800	Enhancers	Primary T helper naive cells fromperipheralblood	blood
2	chr3:43256200-43267000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
3	chr3:43256800-43264800	Enhancers	Fetal Thymus	thymus
4	chr3:43256800-43264800	Enhancers	Thymus	Thymus
5	chr3:43257200-43269400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr3:43257400-43266600	Enhancers	Primary T helper cells fromperipheralblood	blood
7	chr3:43261600-43267200	Enhancers	Primary T helper cells PMA-I stimulated	--
8	chr3:43262200-43266800	Enhancers	Primary T helper naive cells from peripheral blood	blood
9	chr3:43262600-43264800	Enhancers	Primary T cells fromperipheralblood	blood
10	chr3:43263200-43266600	Enhancers	Primary T killer memory cells from peripheral blood	blood
11	chr3:43263200-43267000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
12	chr3:43263400-43266600	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
13	chr3:43263600-43266200	Weak transcription	Pancreas	Pancrea
14	chr3:43264000-43264600	Enhancers	Primary T regulatory cells fromperipheralblood	blood
15	chr3:43264000-43264800	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
16	chr3:43264000-43264800	ZNF genes & repeats	Aorta	Aorta
17	chr3:43264000-43265000	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
18	chr3:43264200-43264400	Enhancers	Primary T cells from cord blood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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