Variant report

Variant	rs556096127
Chromosome Location	chr6:82794278-82794279
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1021464	chr6:82738920-82876526	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Genic enhancers Bivalent Enhancer	Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv830713	chr6:82761201-82953570	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
3	nsv527345	chr6:82794111-82797619	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:82783400-82797800	Weak transcription	Left Ventricle	heart
2	chr6:82792200-82799600	Enhancers	HepG2	liver
3	chr6:82792800-82794400	Enhancers	Muscle Satellite Cultured Cells	--
4	chr6:82792800-82795200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr6:82793200-82794400	Enhancers	Osteobl	bone
6	chr6:82793800-82794600	Enhancers	Brain Hippocampus Middle	brain
7	chr6:82793800-82795000	Enhancers	Brain Substantia Nigra	brain
8	chr6:82794000-82794400	Enhancers	iPS-20b Cell Line	embryonic stem cell
9	chr6:82794000-82794600	Enhancers	Brain Inferior Temporal Lobe	brain
10	chr6:82794000-82794800	Enhancers	Brain Anterior Caudate	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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