The 2.0 version of rSNPBase

Variant report

Variant rs556099051
Chromosome Location chr1:93004826-93004827
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:92968200-93042800 Weak transcription HSMM muscle
2 chr1:92972600-93013400 Weak transcription Ovary ovary
3 chr1:92976400-93042400 Weak transcription Fetal Stomach stomach
4 chr1:92977600-93010600 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr1:92977600-93013200 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr1:92981800-93033400 Weak transcription NHEK skin
7 chr1:92983600-93066200 Weak transcription Adipose Nuclei Adipose
8 chr1:92993000-93007400 Weak transcription Left Ventricle heart
9 chr1:92993800-93007200 Weak transcription Monocytes-CD14+_RO01746 blood
10 chr1:92994600-93066000 Weak transcription Placenta Placenta
11 chr1:92999400-93016600 Weak transcription Breast Myoepithelial Primary Cells Breast
12 chr1:93001400-93024200 Weak transcription Psoas Muscle Psoas
13 chr1:93002800-93007400 Weak transcription Primary monocytes fromperipheralblood blood
14 chr1:93003800-93005000 Enhancers Primary Natural Killer cells fromperipheralblood blood
15 chr1:93004000-93005000 Enhancers Fetal Adrenal Gland Adrenal Gland
16 chr1:93004000-93005000 Enhancers Small Intestine intestine
17 chr1:93004000-93005600 Enhancers Primary T cells from cord blood blood
18 chr1:93004000-93005800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr1:93004200-93007400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr1:93004400-93005000 Enhancers Primary T cells fromperipheralblood blood
21 chr1:93004400-93005000 Enhancers Primary T regulatory cells fromperipheralblood blood
22 chr1:93004400-93006400 Weak transcription Primary neutrophils fromperipheralblood blood
23 chr1:93004400-93008600 Weak transcription Fetal Thymus thymus
24 chr1:93004400-93008800 Weak transcription Primary hematopoietic stem cells blood
25 chr1:93004400-93010400 Weak transcription Gastric stomach
26 chr1:93004400-93012400 Weak transcription Fetal Kidney kidney
27 chr1:93004400-93012600 Weak transcription Fetal Intestine Large intestine
28 chr1:93004400-93022200 Weak transcription Pancreas Pancrea
29 chr1:93004400-93028400 Weak transcription Primary B cells from cord blood blood
30 chr1:93004400-93032400 Weak transcription Fetal Intestine Small intestine
31 chr1:93004400-93033000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr1:93004400-93042200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr1:93004400-93042400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr1:93004400-93070000 Weak transcription Rectal Mucosa Donor 29 rectum
35 chr1:93004600-93005000 Weak transcription Primary hematopoietic stem cells short term culture blood
36 chr1:93004600-93005000 Enhancers Primary T helper cells PMA-I stimulated --
37 chr1:93004600-93005000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr1:93004800-93005800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
39 chr1:93004800-93008400 Weak transcription Liver Liver

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Last update: Aug 31, 2015