| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv429936 |
chr1:179790343-180214343 |
Active TSS Strong transcription Flanking Active TSS Weak transcription Enhancers Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
72 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv1003739 |
chr1:180027760-180483292 |
Enhancers ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
67 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv535217 |
chr1:180027760-180483292 |
Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
67 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv1012558 |
chr1:180027960-180217613 |
Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Strong transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
33 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv535218 |
chr1:180027960-180217613 |
Weak transcription Flanking Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Enhancers Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
33 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv497930 |
chr1:180031321-180220723 |
Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Genic enhancers Enhancers Bivalent Enhancer Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
33 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv533073 |
chr1:180031328-180217612 |
Strong transcription Active TSS Enhancers Flanking Active TSS Genic enhancers Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
33 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
nsv916937 |
chr1:180031328-180220685 |
Strong transcription Weak transcription Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Bivalent Enhancer Genic enhancers Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
33 gene(s)
|
inside rSNPs
|
diseases
|
| 9 |
esv3347813 |
chr1:180107179-180109227 |
Enhancers Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page:
1
