Variant report

Variant rs556179222
Chromosome Location chr21:47987470-47987471
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:47943600-47990600 Strong transcription Fetal Stomach stomach
2 chr21:47947600-47989000 Strong transcription Dnd41 blood
3 chr21:47947600-47991000 Strong transcription Fetal Muscle Leg muscle
4 chr21:47948400-47993600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr21:47948600-47993200 Strong transcription Fetal Intestine Large intestine
6 chr21:47949000-47988200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr21:47949000-47993600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr21:47949800-47991800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr21:47950000-47989200 Strong transcription Skeletal Muscle Female skeletal muscle
10 chr21:47950000-47991000 Strong transcription Sigmoid Colon Sigmoid Colon
11 chr21:47950200-47993200 Strong transcription Stomach Smooth Muscle stomach
12 chr21:47953000-47988200 Strong transcription Gastric stomach
13 chr21:47953000-47988600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
14 chr21:47953200-47988400 Strong transcription Fetal Intestine Small intestine
15 chr21:47953200-47993000 Strong transcription Osteobl bone
16 chr21:47953400-47988000 Strong transcription Cortex derived primary cultured neurospheres brain
17 chr21:47956200-48001800 Weak transcription Stomach Mucosa stomach
18 chr21:47961600-47992800 Strong transcription Brain Hippocampus Middle brain
19 chr21:47964600-47988400 Strong transcription Brain Germinal Matrix brain
20 chr21:47965200-47991200 Strong transcription HUES6 Cell Line embryonic stem cell
21 chr21:47965800-47988600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr21:47965800-47993400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr21:47966200-47993400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr21:47966400-47987800 Strong transcription Muscle Satellite Cultured Cells --
25 chr21:47966600-47988200 Strong transcription Esophagus oesophagus
26 chr21:47967400-47994800 Weak transcription ES-I3 Cell Line embryonic stem cell
27 chr21:47968600-47990800 Strong transcription Fetal Brain Female brain
28 chr21:47969400-47987600 Strong transcription Aorta Aorta
29 chr21:47969600-47988200 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr21:47969600-47988400 Strong transcription Colonic Mucosa Colon
31 chr21:47969800-47989200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
32 chr21:47970200-47992400 Strong transcription Duodenum Smooth Muscle Duodenum
33 chr21:47970400-47988200 Strong transcription Placenta Amnion Placenta Amnion
34 chr21:47970400-47993200 Strong transcription Brain Cingulate Gyrus brain
35 chr21:47971000-47989200 Strong transcription Placenta Placenta
36 chr21:47971600-47991600 Strong transcription Brain Substantia Nigra brain
37 chr21:47972000-47988800 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr21:47973200-47993000 Strong transcription Duodenum Mucosa Duodenum
39 chr21:47973400-47993200 Strong transcription Rectal Smooth Muscle rectum
40 chr21:47973600-47989600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr21:47973600-47990600 Strong transcription Breast Myoepithelial Primary Cells Breast
42 chr21:47973600-47991600 Strong transcription Rectal Mucosa Donor 31 rectum
43 chr21:47973600-47992600 Strong transcription Monocytes-CD14+_RO01746 blood
44 chr21:47973800-47990600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr21:47974200-47988200 Strong transcription NHLF lung
46 chr21:47974200-47991200 Strong transcription Primary monocytes fromperipheralblood blood
47 chr21:47974400-47987800 Strong transcription iPS-15b Cell Line embryonic stem cell
48 chr21:47975200-47992800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr21:47975600-47988600 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
50 chr21:47975800-47991000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell

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