The 2.0 version of rSNPBase

Variant report

Variant rs556185318
Chromosome Location chr6:37450990-37450991
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:37424600-37451600 Strong transcription Fetal Thymus thymus
2 chr6:37435800-37452000 Strong transcription Primary monocytes fromperipheralblood blood
3 chr6:37436200-37457200 Strong transcription Primary T cells from cord blood blood
4 chr6:37436400-37454600 Strong transcription Thymus Thymus
5 chr6:37436600-37452000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr6:37436600-37452000 Strong transcription Fetal Lung lung
7 chr6:37436800-37451800 Strong transcription Primary T regulatory cells fromperipheralblood blood
8 chr6:37436800-37452200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr6:37437000-37451800 Strong transcription Primary T helper cells fromperipheralblood blood
10 chr6:37437400-37454400 Strong transcription Dnd41 blood
11 chr6:37437600-37451400 Strong transcription Primary T helper 17 cells PMA-I stimulated --
12 chr6:37437600-37451800 Strong transcription Primary B cells from peripheral blood blood
13 chr6:37437600-37452000 Strong transcription Monocytes-CD14+_RO01746 blood
14 chr6:37437800-37451600 Strong transcription Primary T helper cells PMA-I stimulated --
15 chr6:37438000-37451600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
16 chr6:37438000-37454600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
17 chr6:37438200-37451600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr6:37438200-37451600 Strong transcription Primary neutrophils fromperipheralblood blood
19 chr6:37438200-37451800 Strong transcription Sigmoid Colon Sigmoid Colon
20 chr6:37438200-37452000 Strong transcription Primary hematopoietic stem cells short term culture blood
21 chr6:37438200-37452000 Strong transcription Rectal Mucosa Donor 29 rectum
22 chr6:37438200-37452400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr6:37438200-37454400 Strong transcription Placenta Placenta
24 chr6:37438400-37451000 Strong transcription Duodenum Smooth Muscle Duodenum
25 chr6:37438400-37451200 Strong transcription Primary T cells fromperipheralblood blood
26 chr6:37438400-37451400 Strong transcription Primary T helper naive cells fromperipheralblood blood
27 chr6:37438400-37451400 Strong transcription Colonic Mucosa Colon
28 chr6:37438400-37451600 Strong transcription Primary T helper naive cells from peripheral blood blood
29 chr6:37438400-37451800 Strong transcription Duodenum Mucosa Duodenum
30 chr6:37438400-37452000 Strong transcription Aorta Aorta
31 chr6:37438400-37452000 Strong transcription Rectal Mucosa Donor 31 rectum
32 chr6:37438400-37453400 Strong transcription Fetal Intestine Large intestine
33 chr6:37438600-37451800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
34 chr6:37438600-37453000 Strong transcription Lung lung
35 chr6:37438600-37454600 Strong transcription Spleen Spleen
36 chr6:37439000-37452000 Strong transcription Ovary ovary
37 chr6:37439000-37452200 Strong transcription HepG2 liver
38 chr6:37439200-37451600 Strong transcription Placenta Amnion Placenta Amnion
39 chr6:37439200-37452000 Strong transcription Pancreas Pancrea
40 chr6:37439200-37453000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr6:37439200-37456400 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr6:37439200-37456400 Strong transcription Fetal Intestine Small intestine
43 chr6:37439400-37452200 Strong transcription NHLF lung
44 chr6:37440800-37451200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
45 chr6:37441600-37452000 Strong transcription Skeletal Muscle Female skeletal muscle
46 chr6:37441800-37451000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr6:37441800-37451000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr6:37441800-37451400 Strong transcription Brain Hippocampus Middle brain
49 chr6:37441800-37451800 Strong transcription Liver Liver
50 chr6:37441800-37452000 Strong transcription Esophagus oesophagus

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Last update: Aug 31, 2015