Variant report

Variant	rs556196628
Chromosome Location	chr1:59198604-59198605
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2754829	chr1:59197556-59215791	Weak transcription Enhancers ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Strong transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:59192600-59204200	Weak transcription	Primary neutrophils fromperipheralblood	blood
2	chr1:59193600-59200200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr1:59197200-59198800	Enhancers	Breast Myoepithelial Primary Cells	Breast
4	chr1:59197400-59198800	Enhancers	Rectal Smooth Muscle	rectum
5	chr1:59197800-59198800	Enhancers	Placenta Amnion	Placenta Amnion
6	chr1:59198000-59200600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr1:59198200-59200000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
8	chr1:59198200-59201400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
9	chr1:59198200-59206200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
10	chr1:59198400-59199800	Weak transcription	Muscle Satellite Cultured Cells	--
11	chr1:59198400-59200200	Weak transcription	NHDF-Ad	bronchial
12	chr1:59198600-59205800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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