Variant report

Variant	rs556211269
Chromosome Location	chr7:103773685-103773686
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr7:103772435..103775034-chr7:103782571..103784450,2	K562	blood:
2	chr7:103764338..103766709-chr7:103771268..103773724,2	K562	blood:
3	chr7:103766834..103768686-chr7:103770903..103773762,2	K562	blood:

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3477444	chr7:103772134-103774939	Strong transcription Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
2	esv3477445	chr7:103772193-103774777	Strong transcription Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv19884	chr7:103772400-103774548	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:103761400-103778600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr7:103762800-103774200	Weak transcription	HepG2	liver
3	chr7:103763000-103777600	Weak transcription	Fetal Intestine Small	intestine
4	chr7:103763400-103774200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
5	chr7:103763400-103779400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr7:103763600-103776200	Weak transcription	Colonic Mucosa	Colon
7	chr7:103763800-103815000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
8	chr7:103764000-103783200	Weak transcription	NHLF	lung
9	chr7:103764000-103829800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
10	chr7:103764400-103776200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
11	chr7:103764400-103776400	Weak transcription	Primary neutrophils fromperipheralblood	blood
12	chr7:103764400-103776400	Weak transcription	NH-A	brain
13	chr7:103764400-103777800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
14	chr7:103764400-103778400	Weak transcription	NHDF-Ad	bronchial
15	chr7:103764400-103820200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
16	chr7:103765000-103774600	Strong transcription	Primary B cells from cord blood	blood
17	chr7:103765400-103778000	Weak transcription	Stomach Mucosa	stomach
18	chr7:103765600-103815000	Weak transcription	Brain Angular Gyrus	brain
19	chr7:103765600-103840200	Weak transcription	Small Intestine	intestine
20	chr7:103765800-103776400	Weak transcription	Fetal Brain Female	brain
21	chr7:103766000-103774400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
22	chr7:103766000-103776200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
23	chr7:103766000-103778000	Weak transcription	H9 Cell Line	embryonic stem cell
24	chr7:103766200-103774000	Weak transcription	Lung	lung
25	chr7:103766200-103779000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
26	chr7:103766200-103779000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
27	chr7:103766200-103800000	Weak transcription	H1 Cell Line	embryonic stem cell
28	chr7:103766200-103803800	Weak transcription	Pancreas	Pancrea
29	chr7:103766200-103816000	Weak transcription	Brain Substantia Nigra	brain
30	chr7:103766200-103823600	Weak transcription	Esophagus	oesophagus
31	chr7:103766200-103838400	Weak transcription	Spleen	Spleen
32	chr7:103766400-103774000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
33	chr7:103766400-103822600	Weak transcription	Colon Smooth Muscle	Colon
34	chr7:103767200-103773800	Weak transcription	Fetal Stomach	stomach
35	chr7:103767200-103776800	Weak transcription	Brain Anterior Caudate	brain
36	chr7:103767200-103779000	Weak transcription	Fetal Brain Male	brain
37	chr7:103767200-103829200	Weak transcription	Gastric	stomach
38	chr7:103767200-103843600	Weak transcription	Right Ventricle	heart
39	chr7:103767400-103774000	Weak transcription	Rectal Smooth Muscle	rectum
40	chr7:103767400-103778400	Weak transcription	Psoas Muscle	Psoas
41	chr7:103767600-103779000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
42	chr7:103767600-103820200	Weak transcription	Brain Germinal Matrix	brain
43	chr7:103768000-103779800	Weak transcription	Brain Cingulate Gyrus	brain
44	chr7:103769000-103776800	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
45	chr7:103769200-103778800	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
46	chr7:103769200-103822600	Weak transcription	Fetal Kidney	kidney
47	chr7:103769400-103777000	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
48	chr7:103769400-103778000	Strong transcription	Liver	Liver
49	chr7:103769400-103778200	Strong transcription	Primary monocytes fromperipheralblood	blood
50	chr7:103769400-103778400	Strong transcription	Breast Myoepithelial Primary Cells	Breast

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