Variant report

Variant	rs556227184
Chromosome Location	chr8:130017455-130017456
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv437633	chr8:130014200-130022257	Enhancers Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
2	nsv891442	chr8:130016499-130130604	Enhancers Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv891443	chr8:130016499-130220746	Weak transcription Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Active TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:31 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130016600-130018400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
2	chr8:130017000-130018000	Enhancers	HSMM	muscle
3	chr8:130017000-130018200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr8:130017000-130018200	Enhancers	Muscle Satellite Cultured Cells	--
5	chr8:130017000-130018200	Enhancers	Cortex derived primary cultured neurospheres	brain
6	chr8:130017000-130018400	Enhancers	HSMMtube	muscle
7	chr8:130017000-130019600	Enhancers	HMEC	breast
8	chr8:130017200-130017600	Enhancers	Fetal Brain Female	brain
9	chr8:130017200-130017600	Enhancers	Fetal Stomach	stomach
10	chr8:130017200-130017800	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
11	chr8:130017200-130017800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
12	chr8:130017200-130017800	Enhancers	Brain Hippocampus Middle	brain
13	chr8:130017200-130018000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr8:130017200-130018000	Enhancers	NH-A	brain
15	chr8:130017200-130018000	Enhancers	Osteobl	bone
16	chr8:130017200-130018200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
17	chr8:130017200-130018200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
18	chr8:130017200-130018400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
19	chr8:130017200-130018400	Enhancers	NHDF-Ad	bronchial
20	chr8:130017200-130019400	Genic enhancers	Dnd41	blood
21	chr8:130017200-130019800	Enhancers	NHEK	skin
22	chr8:130017400-130017800	Enhancers	ES-I3 Cell Line	embryonic stem cell
23	chr8:130017400-130017800	Enhancers	Brain Anterior Caudate	brain
24	chr8:130017400-130017800	Enhancers	Brain Cingulate Gyrus	brain
25	chr8:130017400-130017800	Enhancers	Brain Substantia Nigra	brain
26	chr8:130017400-130017800	Enhancers	Fetal Brain Male	brain
27	chr8:130017400-130017800	Enhancers	Skeletal Muscle Female	skeletal muscle
28	chr8:130017400-130017800	Enhancers	A549	lung
29	chr8:130017400-130018200	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
30	chr8:130017400-130018400	Enhancers	Fetal Muscle Leg	muscle
31	chr8:130017400-130019200	Enhancers	Breast Myoepithelial Primary Cells	Breast

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