Variant report

Variant	rs556228229
Chromosome Location	chr17:46286975-46286976
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3392389	chr17:46286830-46287068	Weak transcription Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:46266800-46298600	Weak transcription	Thymus	Thymus
2	chr17:46266800-46318200	Weak transcription	Primary B cells from peripheral blood	blood
3	chr17:46273200-46293000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
4	chr17:46273200-46302800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
5	chr17:46273200-46314000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
6	chr17:46273600-46287200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
7	chr17:46274000-46290000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
8	chr17:46274200-46297200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
9	chr17:46275200-46287400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
10	chr17:46277400-46287200	Weak transcription	GM12878-XiMat	blood
11	chr17:46280000-46295800	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
12	chr17:46281200-46287000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
13	chr17:46282800-46288000	Weak transcription	Fetal Thymus	thymus
14	chr17:46283400-46287400	Weak transcription	Primary T cells from cord blood	blood
15	chr17:46283600-46287000	Weak transcription	Primary T helper cells fromperipheralblood	blood
16	chr17:46283600-46292800	Weak transcription	Primary T helper cells PMA-I stimulated	--
17	chr17:46283600-46314000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
18	chr17:46286800-46288400	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
19	chr17:46286800-46297400	Strong transcription	Primary T cells fromperipheralblood	blood

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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