Variant report

Variant	rs556231511
Chromosome Location	chr9:94558283-94558284
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:94547554..94551405-chr9:94555591..94559410,4	K562	blood:

Extended variants
information (count: 9 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1045332	chr9:94352661-94656016	Active TSS Bivalent Enhancer Enhancers Strong transcription Weak transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	6 gene(s)	inside rSNPs	diseases
2	nsv1047426	chr9:94363211-94758114	Weak transcription Bivalent Enhancer Active TSS Enhancers Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	8 gene(s)	inside rSNPs	diseases
3	nsv531631	chr9:94373847-94633213	Weak transcription Enhancers Bivalent Enhancer Strong transcription Active TSS Flanking Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
4	nsv1036176	chr9:94500213-94639367	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Strong transcription Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
5	nsv540171	chr9:94500213-94639367	Weak transcription Enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
6	nsv949008	chr9:94500776-95182133	Enhancers ZNF genes & repeats Weak transcription Bivalent Enhancer Strong transcription Flanking Active TSS Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	55 gene(s)	inside rSNPs	diseases
7	nsv523940	chr9:94546564-94573753	Weak transcription Enhancers Genic enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Strong transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
8	nsv512108	chr9:94557989-94561553	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
9	nsv518372	chr9:94558126-94605908	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:94553200-94561200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr9:94553600-94558400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr9:94555400-94562000	Weak transcription	Right Atrium	heart
4	chr9:94557800-94558600	Enhancers	Fetal Lung	lung
5	chr9:94557800-94559000	Enhancers	Colon Smooth Muscle	Colon
6	chr9:94557800-94559000	Enhancers	K562	blood
7	chr9:94557800-94559200	Enhancers	Stomach Smooth Muscle	stomach
8	chr9:94558000-94558600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
9	chr9:94558000-94558600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr9:94558000-94558600	Enhancers	Fetal Intestine Large	intestine
11	chr9:94558000-94558800	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
12	chr9:94558000-94558800	Enhancers	Fetal Stomach	stomach
13	chr9:94558000-94559000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
14	chr9:94558000-94559000	Enhancers	Fetal Intestine Small	intestine
15	chr9:94558000-94559000	Enhancers	Ovary	ovary
16	chr9:94558000-94559000	Enhancers	Rectal Mucosa Donor 29	rectum
17	chr9:94558000-94559000	Enhancers	Rectal Mucosa Donor 31	rectum
18	chr9:94558000-94559000	Enhancers	Rectal Smooth Muscle	rectum
19	chr9:94558000-94559000	Enhancers	NHEK	skin
20	chr9:94558000-94559200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
21	chr9:94558000-94559200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
22	chr9:94558200-94558400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
23	chr9:94558200-94558400	Enhancers	Duodenum Mucosa	Duodenum
24	chr9:94558200-94558600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
25	chr9:94558200-94558600	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
26	chr9:94558200-94559000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
27	chr9:94558200-94559000	Enhancers	Primary T cells fromperipheralblood	blood
28	chr9:94558200-94559000	Enhancers	Sigmoid Colon	Sigmoid Colon
29	chr9:94558200-94559200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin

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