The 2.0 version of rSNPBase

Variant report

Variant rs556310018
Chromosome Location chr1:94702478-94702479
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94698200-94702800 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
2 chr1:94699200-94703600 Active TSS Breast Myoepithelial Primary Cells Breast
3 chr1:94699600-94703800 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr1:94699800-94702600 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr1:94699800-94703200 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr1:94699800-94703400 Active TSS HMEC breast
7 chr1:94700200-94703600 Active TSS Skeletal Muscle Male skeletal muscle
8 chr1:94700400-94702600 Bivalent/Poised TSS Fetal Kidney kidney
9 chr1:94700400-94703200 Active TSS Skeletal Muscle Female skeletal muscle
10 chr1:94700600-94702800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr1:94700600-94703400 Active TSS Muscle Satellite Cultured Cells --
12 chr1:94700600-94703800 Active TSS Right Atrium heart
13 chr1:94700800-94702800 Bivalent/Poised TSS Brain Hippocampus Middle brain
14 chr1:94700800-94703200 Bivalent/Poised TSS Brain Anterior Caudate brain
15 chr1:94700800-94703400 Active TSS Stomach Smooth Muscle stomach
16 chr1:94700800-94703600 Active TSS NHLF lung
17 chr1:94700800-94703800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr1:94701000-94703400 Active TSS Fetal Muscle Trunk muscle
19 chr1:94701000-94703400 Active TSS NHEK skin
20 chr1:94701000-94703600 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr1:94701000-94703600 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
22 chr1:94701000-94703600 Active TSS NHDF-Ad bronchial
23 chr1:94701000-94703800 Active TSS Psoas Muscle Psoas
24 chr1:94701000-94703800 Active TSS Right Ventricle heart
25 chr1:94701000-94704000 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
26 chr1:94701200-94703000 Active TSS Aorta Aorta
27 chr1:94701200-94703200 Bivalent/Poised TSS Duodenum Mucosa Duodenum
28 chr1:94701200-94703400 Active TSS Fetal Heart heart
29 chr1:94701200-94703600 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr1:94701200-94703600 Active TSS HSMM muscle
31 chr1:94701200-94703600 Active TSS HSMMtube muscle
32 chr1:94701200-94703800 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr1:94701200-94703800 Active TSS Pancreatic Islets Pancreatic Islet
34 chr1:94701200-94703800 Active TSS Left Ventricle heart
35 chr1:94701400-94702600 Flanking Bivalent TSS/Enh HUES64 Cell Line embryonic stem cell
36 chr1:94701400-94702600 Bivalent/Poised TSS Brain Substantia Nigra brain
37 chr1:94701400-94702600 Bivalent/Poised TSS Rectal Smooth Muscle rectum
38 chr1:94701400-94703400 Active TSS Pancreas Pancrea
39 chr1:94701400-94703400 Active TSS HUVEC blood vessel
40 chr1:94701400-94703400 Active TSS NH-A brain
41 chr1:94701400-94703600 Active TSS Lung lung
42 chr1:94701400-94703600 Active TSS Ovary ovary
43 chr1:94701400-94703600 Active TSS A549 lung
44 chr1:94701400-94703800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr1:94701600-94702600 Flanking Bivalent TSS/Enh H9 Derived Neuron Cultured Cells ES cell derived
46 chr1:94701600-94703200 Bivalent/Poised TSS Thymus Thymus
47 chr1:94701600-94703600 Bivalent/Poised TSS Brain Cingulate Gyrus brain
48 chr1:94701600-94703600 Flanking Bivalent TSS/Enh Brain Germinal Matrix brain
49 chr1:94701600-94703600 Active TSS Placenta Amnion Placenta Amnion
50 chr1:94701600-94703800 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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Last update: Aug 31, 2015