Variant report

Variant rs556483342
Chromosome Location chr10:44876744-44876745
allele -/G
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:44850600-44877600 Weak transcription Duodenum Mucosa Duodenum
2 chr10:44860000-44879000 Weak transcription Gastric stomach
3 chr10:44864600-44876800 Strong transcription Fetal Stomach stomach
4 chr10:44864800-44877800 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr10:44865600-44878000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr10:44866000-44877600 Weak transcription Fetal Brain Female brain
7 chr10:44866400-44878600 Weak transcription Liver Liver
8 chr10:44866600-44877600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr10:44867000-44878200 Weak transcription Brain Hippocampus Middle brain
10 chr10:44867400-44878000 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr10:44867600-44878600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr10:44869600-44878200 Weak transcription Brain Substantia Nigra brain
13 chr10:44870200-44877600 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr10:44871000-44877600 Weak transcription Rectal Smooth Muscle rectum
15 chr10:44871600-44877000 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr10:44871800-44877000 Weak transcription Stomach Smooth Muscle stomach
17 chr10:44872400-44877400 Weak transcription Fetal Kidney kidney
18 chr10:44873200-44877600 Weak transcription Lung lung
19 chr10:44874400-44877800 Weak transcription Right Ventricle heart
20 chr10:44874600-44877800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr10:44874600-44877800 Enhancers Psoas Muscle Psoas
22 chr10:44874800-44877800 Weak transcription Spleen Spleen
23 chr10:44874800-44879200 Weak transcription Aorta Aorta
24 chr10:44875200-44877600 Weak transcription Ovary ovary
25 chr10:44875200-44877800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr10:44875200-44878000 Weak transcription NH-A brain
27 chr10:44875600-44877400 Enhancers iPS-15b Cell Line embryonic stem cell
28 chr10:44875800-44877600 Enhancers ES-I3 Cell Line embryonic stem cell
29 chr10:44875800-44878000 Weak transcription NHLF lung
30 chr10:44876000-44877000 Genic enhancers Osteobl bone
31 chr10:44876000-44877600 Weak transcription Colon Smooth Muscle Colon
32 chr10:44876000-44878000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
33 chr10:44876000-44878600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
34 chr10:44876200-44877000 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr10:44876200-44877400 Enhancers HUES64 Cell Line embryonic stem cell
36 chr10:44876200-44877600 Enhancers H9 Cell Line embryonic stem cell
37 chr10:44876200-44877600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
38 chr10:44876200-44877800 Enhancers Brain Germinal Matrix brain
39 chr10:44876200-44878400 Weak transcription ES-WA7 Cell Line embryonic stem cell
40 chr10:44876400-44876800 Enhancers Skeletal Muscle Male skeletal muscle
41 chr10:44876400-44877400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
42 chr10:44876400-44877400 Enhancers iPS-18 Cell Line embryonic stem cell
43 chr10:44876400-44877400 Active TSS Adipose Nuclei Adipose
44 chr10:44876400-44877600 Enhancers HUES48 Cell Line embryonic stem cell
45 chr10:44876400-44877600 Enhancers HUES6 Cell Line embryonic stem cell
46 chr10:44876400-44877600 Weak transcription NHDF-Ad bronchial
47 chr10:44876400-44878000 Enhancers H1 Cell Line embryonic stem cell
48 chr10:44876600-44876800 Enhancers iPS-20b Cell Line embryonic stem cell
49 chr10:44876600-44876800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr10:44876600-44876800 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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