Variant report

Variant rs556601290
Chromosome Location chr10:49790878-49790879
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:49786200-49792800 Enhancers Brain Substantia Nigra brain
2 chr10:49787000-49791800 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
3 chr10:49787800-49791200 Weak transcription Spleen Spleen
4 chr10:49787800-49791400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr10:49787800-49792400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr10:49787800-49793200 Weak transcription Gastric stomach
7 chr10:49787800-49796800 Weak transcription Right Atrium heart
8 chr10:49788000-49792600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr10:49788000-49792800 Strong transcription HUVEC blood vessel
10 chr10:49788000-49796000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr10:49788200-49792200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr10:49788200-49792800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr10:49788200-49795600 Strong transcription Osteobl bone
14 chr10:49788200-49795800 Weak transcription Monocytes-CD14+_RO01746 blood
15 chr10:49788600-49792600 Strong transcription NHDF-Ad bronchial
16 chr10:49788800-49791000 Weak transcription Brain Cingulate Gyrus brain
17 chr10:49788800-49791200 Weak transcription Brain Anterior Caudate brain
18 chr10:49788800-49791400 Weak transcription Brain Angular Gyrus brain
19 chr10:49788800-49791400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr10:49788800-49793400 Strong transcription HSMM muscle
21 chr10:49788800-49795000 Strong transcription Muscle Satellite Cultured Cells --
22 chr10:49788800-49797200 Weak transcription Rectal Smooth Muscle rectum
23 chr10:49789000-49791000 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr10:49789000-49791200 Strong transcription HMEC breast
25 chr10:49789000-49791400 Weak transcription Colon Smooth Muscle Colon
26 chr10:49789000-49793000 Strong transcription NH-A brain
27 chr10:49789400-49793400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr10:49789800-49792600 Strong transcription HSMMtube muscle
29 chr10:49790000-49791200 Weak transcription Pancreas Pancrea
30 chr10:49790000-49791600 Enhancers Adipose Nuclei Adipose
31 chr10:49790200-49791400 Strong transcription Aorta Aorta
32 chr10:49790200-49791400 Strong transcription NHLF lung
33 chr10:49790200-49792000 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr10:49790400-49791400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr10:49790400-49793000 Weak transcription Primary B cells from cord blood blood
36 chr10:49790600-49791400 Enhancers Ovary ovary
37 chr10:49790600-49793400 Weak transcription Primary B cells from peripheral blood blood
38 chr10:49790600-49794800 Weak transcription Brain Hippocampus Middle brain
39 chr10:49790800-49792400 Enhancers Brain Inferior Temporal Lobe brain

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