The 2.0 version of rSNPBase

Variant report

Variant rs55681502
Chromosome Location chr2:113510000-113510001
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:113486600-113511600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr2:113491000-113520800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr2:113492200-113512000 Weak transcription Fetal Heart heart
4 chr2:113494200-113519600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr2:113494400-113521000 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr2:113494800-113520000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr2:113495800-113521400 Weak transcription Small Intestine intestine
8 chr2:113496000-113521200 Weak transcription Rectal Mucosa Donor 29 rectum
9 chr2:113496000-113521200 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr2:113496800-113520800 Weak transcription Placenta Amnion Placenta Amnion
11 chr2:113498800-113513800 Weak transcription Fetal Lung lung
12 chr2:113499000-113511400 Weak transcription Fetal Adrenal Gland Adrenal Gland
13 chr2:113499000-113511400 Weak transcription Gastric stomach
14 chr2:113499200-113512000 Weak transcription H9 Cell Line embryonic stem cell
15 chr2:113500000-113511400 Weak transcription iPS-15b Cell Line embryonic stem cell
16 chr2:113500200-113511000 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr2:113500200-113521200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
18 chr2:113500400-113511400 Weak transcription Muscle Satellite Cultured Cells --
19 chr2:113504200-113510400 Weak transcription Cortex derived primary cultured neurospheres brain
20 chr2:113505400-113511400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr2:113505400-113511400 Weak transcription Placenta Placenta
22 chr2:113505600-113513400 Weak transcription Hela-S3 cervix
23 chr2:113506400-113510200 Weak transcription Fetal Muscle Leg muscle
24 chr2:113506400-113520200 Strong transcription HUES64 Cell Line embryonic stem cell
25 chr2:113507000-113511600 Genic enhancers HepG2 liver
26 chr2:113507200-113520200 Strong transcription HUES48 Cell Line embryonic stem cell
27 chr2:113507400-113511400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr2:113507400-113513000 Enhancers Liver Liver
29 chr2:113507400-113513800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr2:113507400-113519200 Strong transcription K562 blood
31 chr2:113507400-113520200 Strong transcription HUES6 Cell Line embryonic stem cell
32 chr2:113507600-113510600 Enhancers Osteobl bone
33 chr2:113507600-113518200 Strong transcription iPS-20b Cell Line embryonic stem cell
34 chr2:113507800-113510000 Weak transcription Monocytes-CD14+_RO01746 blood
35 chr2:113507800-113512200 Weak transcription Primary B cells from peripheral blood blood
36 chr2:113507800-113513600 Weak transcription Fetal Brain Female brain
37 chr2:113507800-113520000 Strong transcription iPS-18 Cell Line embryonic stem cell
38 chr2:113508000-113511200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
39 chr2:113508000-113511400 Weak transcription Primary neutrophils fromperipheralblood blood
40 chr2:113508000-113511800 Strong transcription Primary hematopoietic stem cells short term culture blood
41 chr2:113508000-113511800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
42 chr2:113508000-113512400 Weak transcription Primary B cells from cord blood blood
43 chr2:113508000-113514800 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
44 chr2:113508000-113520000 Weak transcription Brain Germinal Matrix brain
45 chr2:113508000-113521200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr2:113508200-113510200 Weak transcription Colon Smooth Muscle Colon
47 chr2:113508200-113510200 Weak transcription Fetal Muscle Trunk muscle
48 chr2:113508200-113510200 Weak transcription Thymus Thymus
49 chr2:113508200-113510200 Weak transcription NHEK skin
50 chr2:113508200-113510800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015