The 2.0 version of rSNPBase

Variant report

Variant rs55681623
Chromosome Location chr8:49311301-49311302
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:49307000-49315200 Enhancers Fetal Brain Male brain
2 chr8:49308400-49312200 Enhancers Fetal Lung lung
3 chr8:49308600-49311600 Enhancers Lung lung
4 chr8:49308800-49313000 Enhancers Placenta Placenta
5 chr8:49308800-49313200 Enhancers Spleen Spleen
6 chr8:49308800-49315200 Enhancers Fetal Heart heart
7 chr8:49309000-49311600 Enhancers NHDF-Ad bronchial
8 chr8:49309000-49312600 Enhancers NHLF lung
9 chr8:49309000-49314200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
10 chr8:49309400-49312200 Enhancers Fetal Thymus thymus
11 chr8:49309600-49315400 Enhancers Ovary ovary
12 chr8:49309800-49311400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr8:49309800-49311400 Enhancers Stomach Mucosa stomach
14 chr8:49309800-49312200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr8:49309800-49312600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr8:49309800-49312800 Enhancers Fetal Kidney kidney
17 chr8:49309800-49320200 Weak transcription Aorta Aorta
18 chr8:49310000-49311400 Enhancers Fetal Intestine Small intestine
19 chr8:49310000-49311800 Enhancers NH-A brain
20 chr8:49310000-49312400 Enhancers Placenta Amnion Placenta Amnion
21 chr8:49310000-49312600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr8:49310000-49312800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
23 chr8:49310000-49313000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr8:49310000-49313000 Enhancers Osteobl bone
25 chr8:49310000-49313200 Enhancers Fetal Stomach stomach
26 chr8:49310000-49313800 Enhancers Adipose Nuclei Adipose
27 chr8:49310000-49314000 Enhancers Left Ventricle heart
28 chr8:49310000-49315200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr8:49310000-49316000 Enhancers Fetal Adrenal Gland Adrenal Gland
30 chr8:49310200-49311400 Weak transcription HUVEC blood vessel
31 chr8:49310200-49312000 Enhancers Fetal Brain Female brain
32 chr8:49310200-49312000 Enhancers HSMM muscle
33 chr8:49310200-49312400 Enhancers HSMMtube muscle
34 chr8:49310200-49313000 Enhancers Skeletal Muscle Male skeletal muscle
35 chr8:49310200-49315000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr8:49310200-49315000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
37 chr8:49310400-49311400 Enhancers HUES6 Cell Line embryonic stem cell
38 chr8:49310400-49311400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr8:49310400-49311600 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr8:49310400-49311600 Enhancers Stomach Smooth Muscle stomach
41 chr8:49310400-49313600 Enhancers Fetal Muscle Trunk muscle
42 chr8:49310400-49315400 Enhancers Fetal Muscle Leg muscle
43 chr8:49310600-49311800 Enhancers Skeletal Muscle Female skeletal muscle
44 chr8:49310600-49313200 Enhancers Right Atrium heart
45 chr8:49310800-49311400 Enhancers H1 Cell Line embryonic stem cell
46 chr8:49310800-49312000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr8:49310800-49312000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr8:49310800-49312000 Weak transcription Fetal Intestine Large intestine
49 chr8:49311000-49312400 Weak transcription Duodenum Smooth Muscle Duodenum
50 chr8:49311000-49312800 Weak transcription Right Ventricle heart

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Last update: Aug 31, 2015