Variant report

Variant	rs556856455
Chromosome Location	chr11:119650956-119650957
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv898423	chr11:119541332-119659753	Flanking Active TSS ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
2	nsv528824	chr11:119650105-119661809	Enhancers Bivalent Enhancer Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:119641400-119652600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr11:119645200-119652800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr11:119647000-119654400	Enhancers	Fetal Heart	heart
4	chr11:119648600-119653200	Enhancers	Right Ventricle	heart
5	chr11:119649600-119652600	Weak transcription	GM12878-XiMat	blood
6	chr11:119649600-119653000	Weak transcription	Brain Inferior Temporal Lobe	brain
7	chr11:119649600-119653400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
8	chr11:119650000-119651000	Weak transcription	Left Ventricle	heart
9	chr11:119650000-119651400	Enhancers	Breast Myoepithelial Primary Cells	Breast
10	chr11:119650000-119651400	Bivalent Enhancer	Fetal Stomach	stomach
11	chr11:119650000-119652600	Enhancers	Right Atrium	heart
12	chr11:119650200-119651400	Enhancers	Ovary	ovary
13	chr11:119650400-119651000	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
14	chr11:119650400-119651400	Bivalent Enhancer	HSMMtube	muscle
15	chr11:119650400-119653200	Enhancers	Fetal Muscle Leg	muscle
16	chr11:119650800-119651200	Enhancers	Fetal Lung	lung
17	chr11:119650800-119652200	Enhancers	Fetal Muscle Trunk	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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