Variant report

Variant rs55687422
Chromosome Location chr6:33712750-33712751
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:33706600-33715800 Enhancers Fetal Intestine Large intestine
2 chr6:33707400-33714000 Weak transcription Spleen Spleen
3 chr6:33710600-33713200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr6:33710600-33715200 Enhancers Breast Myoepithelial Primary Cells Breast
5 chr6:33710800-33714200 Enhancers Pancreas Pancrea
6 chr6:33710800-33716600 Active TSS Psoas Muscle Psoas
7 chr6:33711000-33712800 Weak transcription Lung lung
8 chr6:33711200-33713600 Flanking Active TSS Skeletal Muscle Female skeletal muscle
9 chr6:33711200-33715600 Enhancers Fetal Intestine Small intestine
10 chr6:33711400-33713000 Enhancers Rectal Mucosa Donor 29 rectum
11 chr6:33711600-33713200 Enhancers Primary neutrophils fromperipheralblood blood
12 chr6:33711600-33713800 Enhancers Placenta Placenta
13 chr6:33711600-33714000 Enhancers ES-WA7 Cell Line embryonic stem cell
14 chr6:33711600-33714200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
15 chr6:33711800-33713200 Enhancers Esophagus oesophagus
16 chr6:33711800-33713800 Enhancers HUES6 Cell Line embryonic stem cell
17 chr6:33711800-33713800 Enhancers Colonic Mucosa Colon
18 chr6:33711800-33713800 Bivalent Enhancer Stomach Smooth Muscle stomach
19 chr6:33711800-33714400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr6:33711800-33714600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr6:33711800-33714600 Enhancers NHEK skin
22 chr6:33711800-33715000 Active TSS Left Ventricle heart
23 chr6:33711800-33715200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
24 chr6:33711800-33715600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
25 chr6:33711800-33715800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr6:33712000-33712800 Enhancers iPS-15b Cell Line embryonic stem cell
27 chr6:33712000-33712800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
28 chr6:33712000-33712800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
29 chr6:33712000-33713000 Enhancers Rectal Smooth Muscle rectum
30 chr6:33712000-33713000 Flanking Active TSS HepG2 liver
31 chr6:33712000-33713400 Enhancers ES-I3 Cell Line embryonic stem cell
32 chr6:33712000-33713600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
33 chr6:33712000-33713800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr6:33712000-33714000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr6:33712000-33714400 Enhancers Placenta Amnion Placenta Amnion
36 chr6:33712000-33714600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
37 chr6:33712000-33714600 Enhancers iPS-20b Cell Line embryonic stem cell
38 chr6:33712000-33715000 Enhancers HUES48 Cell Line embryonic stem cell
39 chr6:33712000-33715400 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
40 chr6:33712000-33717000 Enhancers H1 Cell Line embryonic stem cell
41 chr6:33712000-33717800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr6:33712200-33712800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr6:33712200-33713600 Enhancers Duodenum Smooth Muscle Duodenum
44 chr6:33712200-33713800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr6:33712200-33714400 Enhancers Rectal Mucosa Donor 31 rectum
46 chr6:33712200-33714800 Enhancers Fetal Stomach stomach
47 chr6:33712200-33714800 Active TSS Right Atrium heart
48 chr6:33712200-33715200 Enhancers NHLF lung
49 chr6:33712400-33712800 Enhancers Brain Cingulate Gyrus brain
50 chr6:33712400-33712800 Enhancers Fetal Muscle Leg muscle

Quick Search:


  
Input of quick search could be:

what's new

Quick links