Variant report

Variant rs556886188
Chromosome Location chr17:45646878-45646879
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:45610000-45670600 Weak transcription Lung lung
2 chr17:45610000-45670600 Weak transcription Pancreas Pancrea
3 chr17:45610000-45676800 Weak transcription Ovary ovary
4 chr17:45610200-45674200 Weak transcription H1 Cell Line embryonic stem cell
5 chr17:45610400-45647000 Weak transcription HUES48 Cell Line embryonic stem cell
6 chr17:45610400-45647600 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr17:45610400-45647600 Weak transcription Osteobl bone
8 chr17:45610400-45662600 Weak transcription Adipose Nuclei Adipose
9 chr17:45610400-45670600 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr17:45610600-45647000 Weak transcription iPS-20b Cell Line embryonic stem cell
11 chr17:45610600-45647000 Weak transcription Dnd41 blood
12 chr17:45610600-45662200 Weak transcription HSMM muscle
13 chr17:45610600-45669200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
14 chr17:45610600-45670200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr17:45610800-45669000 Weak transcription NH-A brain
16 chr17:45611000-45647000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr17:45611200-45647600 Weak transcription HSMMtube muscle
18 chr17:45611200-45674800 Weak transcription Primary B cells from cord blood blood
19 chr17:45616600-45674600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
20 chr17:45617000-45647000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr17:45617000-45647600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr17:45618000-45649200 Weak transcription Right Ventricle heart
23 chr17:45618600-45674600 Weak transcription Fetal Brain Female brain
24 chr17:45618800-45669200 Weak transcription HUVEC blood vessel
25 chr17:45619400-45667400 Weak transcription Cortex derived primary cultured neurospheres brain
26 chr17:45619400-45668200 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr17:45621800-45647000 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr17:45622000-45647600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr17:45622400-45653000 Weak transcription Colonic Mucosa Colon
30 chr17:45622800-45669000 Weak transcription Stomach Smooth Muscle stomach
31 chr17:45623600-45671000 Weak transcription Esophagus oesophagus
32 chr17:45624200-45647000 Weak transcription Duodenum Mucosa Duodenum
33 chr17:45625000-45647000 Weak transcription HUES6 Cell Line embryonic stem cell
34 chr17:45625000-45647000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
35 chr17:45625000-45647600 Weak transcription HUES64 Cell Line embryonic stem cell
36 chr17:45625000-45668200 Weak transcription Skeletal Muscle Female skeletal muscle
37 chr17:45625200-45647000 Weak transcription Fetal Muscle Leg muscle
38 chr17:45625200-45647400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
39 chr17:45625200-45667200 Weak transcription Primary B cells from peripheral blood blood
40 chr17:45625200-45670600 Weak transcription Sigmoid Colon Sigmoid Colon
41 chr17:45625800-45647000 Weak transcription Placenta Placenta
42 chr17:45627000-45647000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr17:45627000-45649200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
44 chr17:45629600-45667400 Weak transcription Left Ventricle heart
45 chr17:45629800-45673400 Weak transcription K562 blood
46 chr17:45630600-45647000 Weak transcription Primary neutrophils fromperipheralblood blood
47 chr17:45631600-45647000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr17:45632600-45647000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
49 chr17:45632600-45647000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr17:45634400-45647000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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