| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv933805 |
chr5:1450724-1941619 |
Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Strong transcription Active TSS Weak transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
96 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv817407 |
chr5:1495354-2191460 |
Weak transcription Strong transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
107 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv869236 |
chr5:1719263-2259100 |
Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer Enhancers Weak transcription ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
66 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv881557 |
chr5:1822326-1932463 |
Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
16 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv880886 |
chr5:1880891-1936443 |
Bivalent Enhancer Bivalent/Poised TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
13 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv880460 |
chr5:1886471-1936443 |
Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Weak transcription Flanking Active TSS Genic enhancers Active TSS Strong transcription ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
10 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv915846 |
chr5:1891098-2167677 |
Active TSS Genic enhancers Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
21 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
nsv881650 |
chr5:1892995-1944487 |
Enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Active TSS ZNF genes & repeats Strong transcription Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
11 gene(s)
|
inside rSNPs
|
diseases
|
| 9 |
nsv880653 |
chr5:1892995-1946697 |
Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Strong transcription Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
11 gene(s)
|
inside rSNPs
|
diseases
|
| 10 |
esv1827099 |
chr5:1893659-1901309 |
Bivalent Enhancer Weak transcription Genic enhancers Enhancers ZNF genes & repeats Strong transcription
|
Chromatin interactive regionlncRNA
|
4 gene(s)
|
inside rSNPs
|
diseases
|
| 11 |
nsv1015576 |
chr5:1894124-1942909 |
Active TSS Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Strong transcription Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
11 gene(s)
|
inside rSNPs
|
diseases
|
