Variant report

Variant	rs556936614
Chromosome Location	chr4:3463794-3463795
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MAX	chr4:3462899-3463986	ECC-1	luminal epithelium:	n/a	chr4:3463505-3463515
2	FOXM1	chr4:3462943-3463876	ECC-1	luminal epithelium:	n/a	n/a
3	MAX	chr4:3462710-3464127	ECC-1	luminal epithelium:	n/a	chr4:3463505-3463515
4	ESR1	chr4:3462786-3463795	ECC-1	luminal epithelium:	n/a	chr4:3463573-3463590 chr4:3463204-3463221 chr4:3462898-3462913
5	GATA3	chr4:3462984-3464037	MCF-7	breast:	n/a	n/a
6	EGR1	chr4:3463109-3463858	MCF-7	breast:	n/a	chr4:3463507-3463521 chr4:3463632-3463642 chr4:3463630-3463643 chr4:3463629-3463644 chr4:3463508-3463521 chr4:3463630-3463643 chr4:3463509-3463519 chr4:3463509-3463520 chr4:3463506-3463516 chr4:3463633-3463642 chr4:3463508-3463521 chr4:3463630-3463643 chr4:3463508-3463521 chr4:3463508-3463521
7	ZBTB7A	chr4:3463080-3466336	ECC-1	luminal epithelium:	n/a	chr4:3465630-3465638 chr4:3465446-3465454 chr4:3465563-3465571
8	EGR1	chr4:3463095-3463902	ECC-1	luminal epithelium:	n/a	chr4:3463507-3463521 chr4:3463632-3463642 chr4:3463630-3463643 chr4:3463629-3463644 chr4:3463508-3463521 chr4:3463630-3463643 chr4:3463509-3463519 chr4:3463509-3463520 chr4:3463506-3463516 chr4:3463633-3463642 chr4:3463508-3463521 chr4:3463630-3463643 chr4:3463508-3463521 chr4:3463508-3463521
9	ESR1	chr4:3462706-3463803	ECC-1	luminal epithelium:	n/a	chr4:3463573-3463590 chr4:3463204-3463221 chr4:3462898-3462913
10	NFIC	chr4:3462838-3463887	ECC-1	luminal epithelium:	n/a	n/a
11	ESR1	chr4:3462628-3463956	ECC-1	luminal epithelium:	n/a	chr4:3463573-3463590 chr4:3463204-3463221 chr4:3462898-3462913
12	NR2F2	chr4:3463052-3463988	MCF-7	breast:	n/a	n/a
13	TCF12	chr4:3462795-3464245	MCF-7	breast:	n/a	n/a
14	GATA3	chr4:3463008-3463847	MCF-7	breast:	n/a	n/a
15	HA-E2F1	chr4:3462979-3463892	MCF-7	breast:	n/a	chr4:3463507-3463516
16	ELF1	chr4:3463335-3463807	GM12878	blood:	n/a	chr4:3463506-3463518
17	TCF12	chr4:3462824-3464072	ECC-1	luminal epithelium:	n/a	n/a
18	EP300	chr4:3462963-3463915	ECC-1	luminal epithelium:	n/a	chr4:3463503-3463512
19	TCF12	chr4:3463081-3463893	MCF-7	breast:	n/a	n/a
20	EP300	chr4:3462863-3464003	ECC-1	luminal epithelium:	n/a	chr4:3463503-3463512
21	SIN3AK20	chr4:3462804-3463968	MCF-7	breast:	n/a	n/a
22	ESR1	chr4:3462637-3463898	ECC-1	luminal epithelium:	n/a	chr4:3463573-3463590 chr4:3463204-3463221 chr4:3462898-3462913
23	EP300	chr4:3462932-3463859	MCF-7	breast:	n/a	chr4:3463503-3463512
24	FOXM1	chr4:3462834-3464004	MCF-7	breast:	n/a	n/a
25	NFIC	chr4:3462880-3463976	ECC-1	luminal epithelium:	n/a	n/a
26	POLR2A	chr4:3463744-3463887	MCF-7	breast:	n/a	n/a
27	ZNF217	chr4:3463103-3463872	MCF-7	breast:	n/a	n/a
28	SIN3AK20	chr4:3463015-3463890	MCF-7	breast:	n/a	n/a
29	ZBTB7A	chr4:3463155-3464109	ECC-1	luminal epithelium:	n/a	n/a
30	EGR1	chr4:3463068-3463914	ECC-1	luminal epithelium:	n/a	chr4:3463507-3463521 chr4:3463632-3463642 chr4:3463630-3463643 chr4:3463629-3463644 chr4:3463508-3463521 chr4:3463630-3463643 chr4:3463509-3463519 chr4:3463509-3463520 chr4:3463506-3463516 chr4:3463633-3463642 chr4:3463508-3463521 chr4:3463630-3463643 chr4:3463508-3463521 chr4:3463508-3463521
31	RAD21	chr4:3463053-3463843	ECC-1	luminal epithelium:	n/a	chr4:3463420-3463433
32	TEAD4	chr4:3462996-3463923	ECC-1	luminal epithelium:	n/a	n/a
33	TCF12	chr4:3462830-3464158	ECC-1	luminal epithelium:	n/a	n/a
34	MAX	chr4:3462710-3463934	MCF-7	breast:	n/a	chr4:3463505-3463515
35	ESR1	chr4:3462966-3463796	ECC-1	luminal epithelium:	n/a	chr4:3463573-3463590 chr4:3463204-3463221
36	FOXM1	chr4:3462984-3463887	ECC-1	luminal epithelium:	n/a	n/a
37	NR2F2	chr4:3463041-3463915	MCF-7	breast:	n/a	n/a
38	ELF1	chr4:3463134-3463889	MCF-7	breast:	n/a	chr4:3463506-3463518
39	FOXM1	chr4:3463098-3463837	MCF-7	breast:	n/a	n/a
40	ESR1	chr4:3462551-3463910	ECC-1	luminal epithelium:	n/a	chr4:3463573-3463590 chr4:3463204-3463221 chr4:3462898-3462913
41	EGR1	chr4:3463291-3463803	MCF-7	breast:	n/a	chr4:3463507-3463521 chr4:3463632-3463642 chr4:3463630-3463643 chr4:3463629-3463644 chr4:3463508-3463521 chr4:3463630-3463643 chr4:3463509-3463519 chr4:3463509-3463520 chr4:3463506-3463516 chr4:3463633-3463642 chr4:3463508-3463521 chr4:3463630-3463643 chr4:3463508-3463521 chr4:3463508-3463521
42	MAX	chr4:3463115-3464036	MCF-7	breast:	n/a	chr4:3463505-3463515

No.	Distal block	Cell Line	Cell type
1	chr4:3076153..3077682-chr4:3463023..3464527,2	MCF-7	breast:
2	chr4:3110927..3117533-chr4:3461507..3465762,15	MCF-7	breast:
3	chr11:61737950..61740369-chr4:3461504..3464468,2	MCF-7	breast:
4	chr4:3292471..3295854-chr4:3462941..3467927,8	MCF-7	breast:
5	chr4:3346041..3348825-chr4:3461682..3464499,2	MCF-7	breast:
6	chr4:3428894..3431544-chr4:3462169..3465013,2	MCF-7	breast:
7	chr4:3462755..3463804-chr4:3486304..3487219,5	MCF-7	breast:
8	chr4:3365688..3366496-chr4:3463170..3464043,2	MCF-7	breast:
9	chr4:3343221..3349626-chr4:3462156..3471133,16	MCF-7	breast:
10	chr4:3438186..3441523-chr4:3461903..3464658,4	MCF-7	breast:

Variant related genes	Relation type
DOK7	TF binding region
ENSG00000175920	Chromatin interaction
ENSG00000159788	Chromatin interaction
ENSG00000251075	Chromatin interaction
ENSG00000197386	Chromatin interaction

Extended variants
information (count: 48 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:48 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv878456	chr4:3215835-3467519	Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
2	nsv428106	chr4:3226182-3752322	Enhancers ZNF genes & repeats Weak transcription Strong transcription Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
3	nsv878462	chr4:3311548-3505448	Strong transcription Enhancers Weak transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
4	nsv1007847	chr4:3317904-3527357	Enhancers Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Bivalent/Poised TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
5	nsv537001	chr4:3317904-3527357	Weak transcription Enhancers Strong transcription Genic enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
6	nsv878463	chr4:3363994-3498896	Enhancers Weak transcription Bivalent Enhancer Strong transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
7	nsv428435	chr4:3386773-3623321	Enhancers Strong transcription Weak transcription Genic enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
8	nsv933265	chr4:3392824-4283640	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	60 gene(s)	inside rSNPs	diseases
9	esv2757918	chr4:3394344-4350986	Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	64 gene(s)	inside rSNPs	diseases
10	esv2759219	chr4:3394344-4350986	Weak transcription Flanking Active TSS Strong transcription Enhancers Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	64 gene(s)	inside rSNPs	diseases
11	nsv878464	chr4:3405165-3505448	Bivalent Enhancer Weak transcription Enhancers Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS ZNF genes & repeats Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
12	nsv878465	chr4:3405165-3566567	Strong transcription Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
13	esv1791851	chr4:3407753-3534022	Bivalent Enhancer Enhancers Strong transcription Bivalent/Poised TSS Weak transcription Genic enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
14	nsv1000383	chr4:3412585-3839781	Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
15	nsv878468	chr4:3413209-3471754	Weak transcription Strong transcription Enhancers Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
16	nsv878469	chr4:3413209-3566567	Weak transcription Genic enhancers Active TSS Enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
17	nsv878470	chr4:3413209-3566567	Weak transcription Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
18	nsv878471	chr4:3413209-3884998	Bivalent Enhancer Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
19	nsv878473	chr4:3414654-3473139	Enhancers Weak transcription Bivalent/Poised TSS Strong transcription Bivalent Enhancer Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
20	esv1816543	chr4:3414654-3942867	Enhancers Bivalent Enhancer Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
21	nsv1001328	chr4:3421979-3654381	Bivalent/Poised TSS Enhancers Bivalent Enhancer Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Weak transcription Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
22	nsv878474	chr4:3422211-3504562	Weak transcription Bivalent Enhancer Strong transcription Enhancers Active TSS Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
23	nsv1008575	chr4:3429062-3487322	Bivalent Enhancer Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
24	nsv967719	chr4:3429579-3535969	Genic enhancers Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
25	nsv470004	chr4:3429856-3584373	Bivalent Enhancer Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Strong transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
26	nsv878475	chr4:3431342-3504562	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Enhancers Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
27	nsv516505	chr4:3434336-3504562	Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
28	nsv1011554	chr4:3436478-3975772	ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
29	nsv537002	chr4:3436478-3975772	Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
30	nsv878476	chr4:3436588-3504562	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
31	nsv10424	chr4:3437534-3468325	Enhancers Weak transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Strong transcription Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
32	nsv878477	chr4:3438643-3584059	ZNF genes & repeats Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
33	nsv4202	chr4:3439530-3484873	Bivalent Enhancer Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
34	nsv829840	chr4:3444216-3623031	Genic enhancers Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Strong transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
35	nsv878478	chr4:3447243-3566567	Bivalent Enhancer Active TSS Genic enhancers Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
36	nsv1002774	chr4:3450810-3577017	Enhancers Weak transcription Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
37	nsv1012371	chr4:3450810-3878976	Enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Weak transcription Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
38	nsv537003	chr4:3450810-3878976	Active TSS Bivalent Enhancer Enhancers Genic enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
39	nsv998670	chr4:3453787-3909535	Active TSS Bivalent Enhancer Strong transcription Flanking Active TSS Enhancers ZNF genes & repeats Weak transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
40	esv3404372	chr4:3461704-3464502	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Weak transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
41	nsv878479	chr4:3461900-3498896	Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Weak transcription Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
42	nsv878480	chr4:3461900-3504562	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
43	nsv878481	chr4:3461900-3566567	Strong transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Weak transcription Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
44	nsv878482	chr4:3461900-3573260	Bivalent Enhancer Strong transcription Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
45	nsv878483	chr4:3461900-3683269	Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Active TSS Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
46	nsv1008394	chr4:3462618-3577017	Weak transcription Enhancers Strong transcription Bivalent Enhancer Flanking Active TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
47	esv1805737	chr4:3463452-3473639	Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Enhancers Active TSS Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Genic enhancers Weak transcription ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
48	esv1806490	chr4:3463724-3501161	Strong transcription Weak transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:38 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:3462000-3463800	Enhancers	HSMMtube	muscle
2	chr4:3462000-3464000	Enhancers	Fetal Muscle Leg	muscle
3	chr4:3462400-3463800	Bivalent Enhancer	Fetal Muscle Trunk	muscle
4	chr4:3462400-3464800	Enhancers	Pancreas	Pancrea
5	chr4:3462600-3464000	Enhancers	Stomach Mucosa	stomach
6	chr4:3462600-3464200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr4:3462600-3464200	Enhancers	Stomach Smooth Muscle	stomach
8	chr4:3462600-3464600	Enhancers	Gastric	stomach
9	chr4:3462600-3464600	Enhancers	Right Ventricle	heart
10	chr4:3462600-3464800	Bivalent Enhancer	Foreskin Keratinocyte Primary Cells skin03	Skin
11	chr4:3462600-3464800	Enhancers	Fetal Heart	heart
12	chr4:3462600-3464800	Enhancers	Left Ventricle	heart
13	chr4:3462600-3465000	Enhancers	HMEC	breast
14	chr4:3462600-3465800	Enhancers	Liver	Liver
15	chr4:3462800-3463800	Enhancers	Breast Myoepithelial Primary Cells	Breast
16	chr4:3462800-3463800	Bivalent Enhancer	Muscle Satellite Cultured Cells	--
17	chr4:3462800-3463800	Enhancers	Aorta	Aorta
18	chr4:3462800-3463800	Enhancers	Esophagus	oesophagus
19	chr4:3462800-3464400	Enhancers	Lung	lung
20	chr4:3462800-3464800	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
21	chr4:3463000-3464000	Enhancers	Duodenum Mucosa	Duodenum
22	chr4:3463000-3464000	Enhancers	Psoas Muscle	Psoas
23	chr4:3463000-3464800	Bivalent Enhancer	H1 Derived Mesenchymal Stem Cells	ES cell derived
24	chr4:3463000-3464800	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
25	chr4:3463200-3464200	Bivalent Enhancer	Colonic Mucosa	Colon
26	chr4:3463200-3464200	Enhancers	GM12878-XiMat	blood
27	chr4:3463200-3465600	Bivalent Enhancer	Placenta	Placenta
28	chr4:3463400-3463800	Enhancers	Fetal Brain Male	brain
29	chr4:3463400-3463800	Bivalent Enhancer	HepG2	liver
30	chr4:3463400-3464200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
31	chr4:3463400-3464800	Bivalent Enhancer	Primary B cells from peripheral blood	blood
32	chr4:3463400-3464800	Enhancers	Cortex derived primary cultured neurospheres	brain
33	chr4:3463400-3465000	Enhancers	Hela-S3	cervix
34	chr4:3463400-3465000	Bivalent Enhancer	NHEK	skin
35	chr4:3463600-3463800	Bivalent Enhancer	iPS DF 19.11 Cell Line	embryonic stem cell
36	chr4:3463600-3464000	Bivalent Enhancer	Foreskin Melanocyte Primary Cells skin01	Skin
37	chr4:3463600-3464600	Flanking Active TSS	HSMM	muscle
38	chr4:3463600-3464800	Bivalent Enhancer	Foreskin Keratinocyte Primary Cells skin02	Skin

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