Variant report

Variant	rs556963772
Chromosome Location	chr4:81423519-81423520
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1013945	chr4:81410029-81454166	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
2	esv3396357	chr4:81421778-81423776	Enhancers Weak transcription Flanking Active TSS Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:81417600-81428800	Weak transcription	NHDF-Ad	bronchial
2	chr4:81419200-81424200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
3	chr4:81420200-81424200	Enhancers	Primary T killer naive cells fromperipheralblood	blood
4	chr4:81420200-81424600	Enhancers	Primary T helper cells PMA-I stimulated	--
5	chr4:81420400-81424000	Enhancers	Primary T cells from cord blood	blood
6	chr4:81420400-81424000	Enhancers	Primary T killer memory cells from peripheral blood	blood
7	chr4:81420800-81424600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
8	chr4:81421200-81423600	Enhancers	Muscle Satellite Cultured Cells	--
9	chr4:81421400-81423600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr4:81421800-81423600	Enhancers	Osteobl	bone
11	chr4:81422400-81429800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
12	chr4:81423000-81424200	Enhancers	Primary T helper naive cells from peripheral blood	blood
13	chr4:81423000-81424200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
14	chr4:81423000-81424400	Enhancers	Primary T helper cells fromperipheralblood	blood
15	chr4:81423200-81424000	Enhancers	HMEC	breast
16	chr4:81423200-81428800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
17	chr4:81423400-81424200	Enhancers	HSMM	muscle
18	chr4:81423400-81424600	Enhancers	Primary T helper 17 cells PMA-I stimulated	--

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links