Variant report

Variant	rs557006198
Chromosome Location	chr10:94636538-94636539
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1041805	chr10:94624759-94699623	Weak transcription Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
2	nsv895898	chr10:94628274-94810665	Weak transcription Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
3	nsv1039122	chr10:94636267-94693706	Enhancers Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:36 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:94620000-94657600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
2	chr10:94624400-94646000	Weak transcription	Fetal Intestine Small	intestine
3	chr10:94633200-94640000	Weak transcription	Primary monocytes fromperipheralblood	blood
4	chr10:94633200-94640200	Weak transcription	Monocytes-CD14+_RO01746	blood
5	chr10:94633400-94636600	Enhancers	HUVEC	blood vessel
6	chr10:94633400-94656600	Weak transcription	Primary B cells from cord blood	blood
7	chr10:94634800-94636800	Weak transcription	Skeletal Muscle Female	skeletal muscle
8	chr10:94634800-94650400	Weak transcription	Psoas Muscle	Psoas
9	chr10:94636000-94637000	Enhancers	Adipose Nuclei	Adipose
10	chr10:94636000-94637200	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
11	chr10:94636000-94637200	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
12	chr10:94636000-94637400	Enhancers	Primary neutrophils fromperipheralblood	blood
13	chr10:94636000-94637400	Enhancers	Primary T helper naive cells from peripheral blood	blood
14	chr10:94636000-94637400	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
15	chr10:94636000-94637400	Enhancers	Primary T helper cells PMA-I stimulated	--
16	chr10:94636000-94637400	Enhancers	Liver	Liver
17	chr10:94636000-94637600	Enhancers	Primary T cells from cord blood	blood
18	chr10:94636000-94638200	Enhancers	Primary T helper cells fromperipheralblood	blood
19	chr10:94636000-94638400	Enhancers	Primary hematopoietic stem cells	blood
20	chr10:94636000-94638600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
21	chr10:94636000-94638600	Enhancers	K562	blood
22	chr10:94636000-94641000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
23	chr10:94636200-94637000	Enhancers	Brain Hippocampus Middle	brain
24	chr10:94636200-94637000	Enhancers	A549	lung
25	chr10:94636200-94637200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
26	chr10:94636200-94637400	Enhancers	Primary T regulatory cells fromperipheralblood	blood
27	chr10:94636200-94639200	Enhancers	Primary hematopoietic stem cells short term culture	blood
28	chr10:94636400-94636600	Enhancers	Primary T cells fromperipheralblood	blood
29	chr10:94636400-94636600	Enhancers	Right Atrium	heart
30	chr10:94636400-94636600	Enhancers	Dnd41	blood
31	chr10:94636400-94636800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
32	chr10:94636400-94637000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
33	chr10:94636400-94637000	Weak transcription	Sigmoid Colon	Sigmoid Colon
34	chr10:94636400-94637200	Enhancers	Primary T killer memory cells from peripheral blood	blood
35	chr10:94636400-94637400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
36	chr10:94636400-94637800	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain

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