Variant report

Variant rs55708341
Chromosome Location chr21:45627581-45627582
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:45622800-45629800 Enhancers Placenta Placenta
2 chr21:45623000-45627600 Weak transcription Osteobl bone
3 chr21:45623000-45629400 Enhancers K562 blood
4 chr21:45623000-45629800 Enhancers Fetal Muscle Leg muscle
5 chr21:45623400-45627800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr21:45624000-45627600 Enhancers Gastric stomach
7 chr21:45624200-45628000 Enhancers Fetal Lung lung
8 chr21:45624200-45628800 Enhancers Fetal Stomach stomach
9 chr21:45624600-45628000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr21:45624600-45629200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr21:45624800-45628200 Weak transcription Brain Cingulate Gyrus brain
12 chr21:45625200-45629600 Enhancers Fetal Adrenal Gland Adrenal Gland
13 chr21:45625400-45627600 Weak transcription Brain Anterior Caudate brain
14 chr21:45625400-45627600 Weak transcription Colon Smooth Muscle Colon
15 chr21:45625400-45627800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr21:45625400-45627800 Bivalent Enhancer Stomach Smooth Muscle stomach
17 chr21:45625400-45628400 Enhancers Small Intestine intestine
18 chr21:45625400-45628800 Enhancers NHLF lung
19 chr21:45625400-45629000 Enhancers Fetal Thymus thymus
20 chr21:45625400-45629400 Enhancers Placenta Amnion Placenta Amnion
21 chr21:45625400-45630200 Enhancers Primary hematopoietic stem cells blood
22 chr21:45625800-45627600 Flanking Active TSS Rectal Mucosa Donor 29 rectum
23 chr21:45625800-45628800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
24 chr21:45625800-45629200 Enhancers Primary monocytes fromperipheralblood blood
25 chr21:45625800-45629600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr21:45626000-45627600 Flanking Active TSS Colonic Mucosa Colon
27 chr21:45626000-45627800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr21:45626000-45627800 Flanking Active TSS Primary B cells from peripheral blood blood
29 chr21:45626000-45628400 Enhancers HUES6 Cell Line embryonic stem cell
30 chr21:45626000-45628400 Enhancers Fetal Intestine Large intestine
31 chr21:45626000-45628400 Enhancers Sigmoid Colon Sigmoid Colon
32 chr21:45626000-45628600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
33 chr21:45626000-45628600 Enhancers Fetal Intestine Small intestine
34 chr21:45626000-45628600 Enhancers Pancreas Pancrea
35 chr21:45626000-45628800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr21:45626000-45628800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr21:45626000-45628800 Enhancers Lung lung
38 chr21:45626000-45628800 Enhancers Spleen Spleen
39 chr21:45626000-45629000 Enhancers Adipose Nuclei Adipose
40 chr21:45626000-45629000 Flanking Active TSS GM12878-XiMat blood
41 chr21:45626000-45629200 Bivalent Enhancer Skeletal Muscle Female skeletal muscle
42 chr21:45626000-45629400 Enhancers Esophagus oesophagus
43 chr21:45626200-45628000 Enhancers Primary T killer naive cells fromperipheralblood blood
44 chr21:45626200-45628600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
45 chr21:45626200-45628600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
46 chr21:45626200-45628800 Enhancers Left Ventricle heart
47 chr21:45626200-45629000 Enhancers Right Ventricle heart
48 chr21:45626200-45629000 Enhancers NHEK skin
49 chr21:45626400-45627600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
50 chr21:45626400-45627800 Weak transcription A549 lung

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