The 2.0 version of rSNPBase

Variant report

Variant rs55711648
Chromosome Location chr1:94514334-94514335
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94505800-94523600 Weak transcription Psoas Muscle Psoas
2 chr1:94509600-94516800 Enhancers Fetal Muscle Leg muscle
3 chr1:94509800-94514800 Enhancers Placenta Placenta
4 chr1:94509800-94515800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr1:94509800-94516800 Enhancers Fetal Adrenal Gland Adrenal Gland
6 chr1:94510000-94514600 Enhancers Left Ventricle heart
7 chr1:94510000-94517400 Enhancers NHDF-Ad bronchial
8 chr1:94510400-94515200 Weak transcription Fetal Lung lung
9 chr1:94511600-94514400 Weak transcription Fetal Intestine Small intestine
10 chr1:94511600-94515400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr1:94511600-94515400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr1:94511600-94515400 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr1:94511600-94515400 Weak transcription A549 lung
14 chr1:94511600-94515800 Enhancers Skeletal Muscle Male skeletal muscle
15 chr1:94511600-94515800 Weak transcription Stomach Mucosa stomach
16 chr1:94511600-94515800 Weak transcription NHLF lung
17 chr1:94511600-94520800 Weak transcription Brain Angular Gyrus brain
18 chr1:94511800-94515200 Weak transcription HMEC breast
19 chr1:94511800-94515200 Weak transcription NHEK skin
20 chr1:94511800-94515400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr1:94511800-94515800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr1:94511800-94518000 Weak transcription Fetal Stomach stomach
23 chr1:94512200-94515000 Enhancers Cortex derived primary cultured neurospheres brain
24 chr1:94512400-94514600 Enhancers Placenta Amnion Placenta Amnion
25 chr1:94512400-94515400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr1:94512400-94515800 Enhancers Right Atrium heart
27 chr1:94512800-94516800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr1:94513000-94516800 Enhancers Muscle Satellite Cultured Cells --
29 chr1:94513200-94514400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
30 chr1:94513200-94514800 Enhancers Fetal Kidney kidney
31 chr1:94513200-94516000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr1:94513200-94516800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr1:94513400-94514400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
34 chr1:94513400-94514600 Flanking Active TSS HepG2 liver
35 chr1:94513400-94514800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr1:94513400-94516000 Enhancers HUES64 Cell Line embryonic stem cell
37 chr1:94513400-94516600 Enhancers HSMM muscle
38 chr1:94513400-94517200 Enhancers Osteobl bone
39 chr1:94513600-94514400 Enhancers Breast Myoepithelial Primary Cells Breast
40 chr1:94513600-94514400 Enhancers NH-A brain
41 chr1:94513600-94514600 Enhancers Aorta Aorta
42 chr1:94513600-94514800 Flanking Active TSS HUVEC blood vessel
43 chr1:94513600-94515400 Weak transcription Spleen Spleen
44 chr1:94513800-94514400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
45 chr1:94513800-94514600 Enhancers HUES48 Cell Line embryonic stem cell
46 chr1:94513800-94514600 Enhancers HUES6 Cell Line embryonic stem cell
47 chr1:94513800-94514800 Enhancers iPS-15b Cell Line embryonic stem cell
48 chr1:94513800-94514800 Enhancers iPS-20b Cell Line embryonic stem cell
49 chr1:94513800-94515400 Weak transcription Fetal Muscle Trunk muscle
50 chr1:94513800-94515400 Weak transcription Lung lung

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Last update: Aug 31, 2015